RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 H7C1W4 665 aa14□□□□□ -0.17
SHROOM3-210ENST00000497440 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
SHROOM3-210ENST00000497440 IARSP41252 1262 aaKnown RBP14□□□□□ -0.17
SHROOM3-210ENST00000497440 CASP7P55210 303 aa14□□□□□ -0.17
SHROOM3-210ENST00000497440 SLFN5Q08AF3 891 aa14□□□□□ -0.17
SHROOM3-210ENST00000497440 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
SHROOM3-210ENST00000497440 RRAGCQ9HB90 399 aa14□□□□□ -0.17
SHROOM3-210ENST00000497440 ZNF277Q9NRM2 450 aaPredicted RBP14□□□□□ -0.17
SHROOM3-210ENST00000497440 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
SHROOM3-210ENST00000497440 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
SHROOM3-210ENST00000497440 COL4A1P02462 1669 aa13.99□□□□□ -0.17
SHROOM3-210ENST00000497440 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
SHROOM3-210ENST00000497440 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
SHROOM3-210ENST00000497440 TAF1P21675 1872 aa13.99□□□□□ -0.17
SHROOM3-210ENST00000497440 E9PSI1 815 aa13.98□□□□□ -0.17
SHROOM3-210ENST00000497440 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-210ENST00000497440 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-210ENST00000497440 CELF1Q92879 486 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-210ENST00000497440 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 PDE8AO60658 829 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 HSPA6P17066 643 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 FSTL1Q12841 308 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 GCKRQ14397 625 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
SHROOM3-210ENST00000497440 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 LTBP1Q14766 1721 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 CSF1RP07333 972 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 CWF19L2Q2TBE0 894 aaKnown RBP13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 TTLL11Q8NHH1 800 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
SHROOM3-210ENST00000497440 KIAA2012Q0VF49 1180 aa13.95□□□□□ -0.18
SHROOM3-210ENST00000497440 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
SHROOM3-210ENST00000497440 GPC2Q8N158 579 aa13.95□□□□□ -0.18
SHROOM3-210ENST00000497440 MPNDQ8N594 471 aa13.95□□□□□ -0.18
SHROOM3-210ENST00000497440 SCN4AP35499 1836 aa13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
SHROOM3-210ENST00000497440 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
SHROOM3-210ENST00000497440 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-210ENST00000497440 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
SHROOM3-210ENST00000497440 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
SHROOM3-210ENST00000497440 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
SHROOM3-210ENST00000497440 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-210ENST00000497440 CTSWP56202 376 aa13.92□□□□□ -0.18
SHROOM3-210ENST00000497440 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-210ENST00000497440 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-210ENST00000497440 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
SHROOM3-210ENST00000497440 UTYO14607 1347 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 ADAMTSL1Q8N6G6 1762 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 F6X3S4 739 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 ALDH1L2Q3SY69 923 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 MIER1Q8N108 512 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 TMX4Q9H1E5 349 aaPredicted RBP13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
SHROOM3-210ENST00000497440 MYH3P11055 1940 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 PPIP5K2O43314 1243 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 SCNN1DP51172 638 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 GPSM2P81274 684 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 FOXO4P98177 505 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 CXCL9Q07325 125 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 AOC3Q16853 763 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 UBE3BQ7Z3V4 1068 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 GREM2Q9H772 168 aa13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
SHROOM3-210ENST00000497440 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
SHROOM3-210ENST00000497440 APLP1P51693 650 aa13.89□□□□□ -0.19
SHROOM3-210ENST00000497440 C16orf71Q8IYS4 520 aaPredicted RBP13.89□□□□□ -0.19
SHROOM3-210ENST00000497440 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
SHROOM3-210ENST00000497440 PTPRCP08575 1304 aa13.89□□□□□ -0.19
SHROOM3-210ENST00000497440 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 KAZALD1Q96I82 304 aa13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
SHROOM3-210ENST00000497440 GRM8O00222 908 aa13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 WASHC4Q2M389 1173 aa13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 CDC5LQ99459 802 aaKnown RBP13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 PGAP2Q9UHJ9 254 aa13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
SHROOM3-210ENST00000497440 PASKQ96RG2 1323 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms