RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 RTL1A6NKG5 1358 aa8.85□□□□□ -0.99
HOXA9-206ENST00000497089 KIF24Q5T7B8 1368 aa8.85□□□□□ -0.99
HOXA9-206ENST00000497089 LRP5O75197 1615 aa8.85□□□□□ -0.99
HOXA9-206ENST00000497089 APBA3O96018 575 aa8.85□□□□□ -0.99
HOXA9-206ENST00000497089 EZH2Q15910 746 aaKnown RBP8.85□□□□□ -0.99
HOXA9-206ENST00000497089 ANKRD24Q8TF21 1146 aa8.85□□□□□ -0.99
HOXA9-206ENST00000497089 NUP188Q5SRE5 1749 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 EXOC5O00471 708 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 PLSCR1O15162 318 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 IL2RBP14784 551 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 IRF5Q13568 498 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 UNC93B1Q9H1C4 597 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 NLRP2Q9NX02 1062 aa8.84□□□□□ -0.99
HOXA9-206ENST00000497089 HOXC9P31274 260 aa8.83□□□□□ -1
HOXA9-206ENST00000497089 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
HOXA9-206ENST00000497089 GLMNQ92990 594 aa8.83□□□□□ -1
HOXA9-206ENST00000497089 EMID1Q96A84 441 aaPredicted RBP8.83□□□□□ -1
HOXA9-206ENST00000497089 GGNBP2Q9H3C7 697 aa8.83□□□□□ -1
HOXA9-206ENST00000497089 NHSQ6T4R5 1651 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 ANKRD26Q9UPS8 1709 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 SRCAPQ6ZRS2 3230 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 POM121CA8CG34 1229 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
HOXA9-206ENST00000497089 RPIAP49247 311 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 AMPHP49418 695 aa8.82□□□□□ -1
HOXA9-206ENST00000497089 RGPD2P0DJD1 1756 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 NSD3Q9BZ95 1437 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 HSPA5P11021 654 aaKnown RBP8.81□□□□□ -1
HOXA9-206ENST00000497089 FBLN1P23142 703 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 SLC19A1P41440 591 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 VAC14Q08AM6 782 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 LIAT1Q6ZQX7 453 aa8.81□□□□□ -1
HOXA9-206ENST00000497089 INSRP06213 1382 aa8.8□□□□□ -1
HOXA9-206ENST00000497089 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
HOXA9-206ENST00000497089 RRS1Q15050 365 aaKnown RBP8.8□□□□□ -1
HOXA9-206ENST00000497089 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
HOXA9-206ENST00000497089 PTF1AQ7RTS3 328 aa8.8□□□□□ -1
HOXA9-206ENST00000497089 CGNL1Q0VF96 1302 aa8.8□□□□□ -1
HOXA9-206ENST00000497089 FLT4P35916 1363 aa8.8□□□□□ -1
HOXA9-206ENST00000497089 SHANK3Q9BYB0 1731 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 GPR37L1O60883 481 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 TRIM32Q13049 653 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 ARMC2Q8NEN0 867 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 FKBPLQ9UIM3 349 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 V9GY48 417 aaPredicted RBP8.79□□□□□ -1
HOXA9-206ENST00000497089 NCAPD2Q15021 1401 aa8.79□□□□□ -1
HOXA9-206ENST00000497089 RGS20O76081 388 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 CD2BP2O95400 341 aaKnown RBP8.78□□□□□ -1
HOXA9-206ENST00000497089 SOX11P35716 441 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 HSP90AB2PQ58FF8 381 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 NBPF14Q5TI25 921 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 NBPF6Q5VWK0 638 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 LTV1Q96GA3 475 aaPredicted RBP8.78□□□□□ -1
HOXA9-206ENST00000497089 NBPF4Q96M43 638 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 BTAF1O14981 1849 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 MAP2P11137 1827 aaKnown RBP8.78□□□□□ -1
HOXA9-206ENST00000497089 SMG6Q86US8 1419 aaKnown RBP8.78□□□□□ -1
HOXA9-206ENST00000497089 MEGF6O75095 1541 aa8.78□□□□□ -1
HOXA9-206ENST00000497089 KCNQ2O43526 872 aa8.77□□□□□ -1.01
HOXA9-206ENST00000497089 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
HOXA9-206ENST00000497089 TXNRD1Q16881 649 aa8.77□□□□□ -1.01
HOXA9-206ENST00000497089 BAP1Q92560 729 aa8.77□□□□□ -1.01
HOXA9-206ENST00000497089 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
HOXA9-206ENST00000497089 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
HOXA9-206ENST00000497089 ZCRB1Q8TBF4 217 aaKnown RBP8.76□□□□□ -1.01
HOXA9-206ENST00000497089 GPKOWQ92917 476 aaPredicted RBP eCLIP8.76□□□□□ -1.01
HOXA9-206ENST00000497089 EMILIN1Q9Y6C2 1016 aa8.76□□□□□ -1.01
HOXA9-206ENST00000497089 WASHC2AQ641Q2 1341 aa8.76□□□□□ -1.01
HOXA9-206ENST00000497089 NSD2O96028 1365 aa8.76□□□□□ -1.01
HOXA9-206ENST00000497089 CASZ1Q86V15 1759 aa8.76□□□□□ -1.01
HOXA9-206ENST00000497089 NR1H3Q13133 447 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 ZNF511Q8NB15 262 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 PANK3Q9H999 370 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 PLEKHG2Q9H7P9 1386 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 KAT6BQ8WYB5 2073 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 PKD1L3Q7Z443 1732 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 DOT1LQ8TEK3 1739 aa8.75□□□□□ -1.01
HOXA9-206ENST00000497089 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 WNT7BP56706 349 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 SH3BP2P78314 561 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 SKOR1P84550 965 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 NPM2Q86SE8 214 aaKnown RBP8.74□□□□□ -1.01
HOXA9-206ENST00000497089 DDX54Q8TDD1 881 aaKnown RBP8.74□□□□□ -1.01
HOXA9-206ENST00000497089 RAPGEF4Q8WZA2 1011 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 ACSBG1Q96GR2 724 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 LY75O60449 1722 aa8.74□□□□□ -1.01
HOXA9-206ENST00000497089 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
HOXA9-206ENST00000497089 POLR3GLQ9BT43 218 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 ALG2Q9H553 416 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
HOXA9-206ENST00000497089 PTK2Q05397 1052 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
HOXA9-206ENST00000497089 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms