RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 L3MBTL3Q96JM7 780 aaPredicted RBP25.13■■□□□ 1.61
COL20A1-208ENST00000496810 PI4KAP2A4QPH2 592 aa25.12■■□□□ 1.61
COL20A1-208ENST00000496810 APLP1P51693 650 aa25.12■■□□□ 1.61
COL20A1-208ENST00000496810 EXOSC9Q06265 439 aaKnown RBP25.12■■□□□ 1.61
COL20A1-208ENST00000496810 PI4KAP1Q8N8J0 262 aa25.12■■□□□ 1.61
COL20A1-208ENST00000496810 STK31Q9BXU1 1019 aa25.12■■□□□ 1.61
COL20A1-208ENST00000496810 IGKV5-2P06315 115 aa25.11■■□□□ 1.61
COL20A1-208ENST00000496810 SF3B3Q15393 1217 aaKnown RBP25.11■■□□□ 1.61
COL20A1-208ENST00000496810 AOC3Q16853 763 aa25.11■■□□□ 1.61
COL20A1-208ENST00000496810 LARGE2Q8N3Y3 721 aa25.11■■□□□ 1.61
COL20A1-208ENST00000496810 ZBTB38Q8NAP3 1195 aaPredicted RBP25.11■■□□□ 1.61
COL20A1-208ENST00000496810 BBOX1O75936 387 aa25.1■■□□□ 1.61
COL20A1-208ENST00000496810 DDX58O95786 925 aaKnown RBP25.1■■□□□ 1.61
COL20A1-208ENST00000496810 KSR2Q6VAB6 950 aa25.1■■□□□ 1.61
COL20A1-208ENST00000496810 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
COL20A1-208ENST00000496810 CCDC191Q8NCU4 936 aa25.1■■□□□ 1.61
COL20A1-208ENST00000496810 CWC25Q9NXE8 425 aaPredicted RBP25.1■■□□□ 1.61
COL20A1-208ENST00000496810 PPIP5K2O43314 1243 aa25.09■■□□□ 1.61
COL20A1-208ENST00000496810 SLC4A2P04920 1241 aa25.09■■□□□ 1.61
COL20A1-208ENST00000496810 JDP2Q8WYK2 163 aa25.09■■□□□ 1.61
COL20A1-208ENST00000496810 VAMP4O75379 141 aa25.08■■□□□ 1.61
COL20A1-208ENST00000496810 PCCAP05165 728 aaPredicted RBP25.08■■□□□ 1.61
COL20A1-208ENST00000496810 CWF19L2Q2TBE0 894 aaKnown RBP25.08■■□□□ 1.61
COL20A1-208ENST00000496810 GRIPAP1Q4V328 841 aa25.08■■□□□ 1.61
COL20A1-208ENST00000496810 RTFDC1Q9BY42 306 aaPredicted RBP25.08■■□□□ 1.61
COL20A1-208ENST00000496810 TAF1DQ9H5J8 278 aaPredicted RBP25.08■■□□□ 1.61
COL20A1-208ENST00000496810 ZNF521Q96K83 1311 aa25.08■■□□□ 1.6
COL20A1-208ENST00000496810 DPP8Q6V1X1 898 aaPredicted RBP25.07■■□□□ 1.6
COL20A1-208ENST00000496810 SEC31BQ9NQW1 1179 aa25.07■■□□□ 1.6
COL20A1-208ENST00000496810 FLIIQ13045 1269 aa25.06■■□□□ 1.6
COL20A1-208ENST00000496810 MPNDQ8N594 471 aa25.06■■□□□ 1.6
COL20A1-208ENST00000496810 DNAJC5GQ8N7S2 189 aa25.06■■□□□ 1.6
COL20A1-208ENST00000496810 CCDC85AQ96PX6 553 aaPredicted RBP25.06■■□□□ 1.6
COL20A1-208ENST00000496810 CHMP4AQ9BY43 222 aa25.06■■□□□ 1.6
COL20A1-208ENST00000496810 GJA3Q9Y6H8 435 aa25.06■■□□□ 1.6
COL20A1-208ENST00000496810 GPC2Q8N158 579 aa25.05■■□□□ 1.6
COL20A1-208ENST00000496810 IQCA1LA6NCM1 817 aa25.04■■□□□ 1.6
COL20A1-208ENST00000496810 NEURL1BA8MQ27 555 aa25.04■■□□□ 1.6
COL20A1-208ENST00000496810 NIM1KQ8IY84 436 aa25.04■■□□□ 1.6
COL20A1-208ENST00000496810 TMX4Q9H1E5 349 aaPredicted RBP25.04■■□□□ 1.6
COL20A1-208ENST00000496810 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
COL20A1-208ENST00000496810 HACL1Q9UJ83 578 aa25.03■■□□□ 1.6
COL20A1-208ENST00000496810 SCN9AQ15858 1988 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 SCNN1DP51172 638 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 GPSM2P81274 684 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 KIAA2012Q0VF49 1180 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 FKBP5Q13451 457 aaPredicted RBP25.02■■□□□ 1.6
COL20A1-208ENST00000496810 CHADLQ6NUI6 762 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 GPR101Q96P66 508 aaPredicted RBP25.02■■□□□ 1.6
COL20A1-208ENST00000496810 CDHR2Q9BYE9 1310 aa25.02■■□□□ 1.6
COL20A1-208ENST00000496810 PDE8AO60658 829 aa25.01■■□□□ 1.59
COL20A1-208ENST00000496810 EPHX2P34913 555 aa25.01■■□□□ 1.59
COL20A1-208ENST00000496810 EAPPQ56P03 285 aaPredicted RBP25.01■■□□□ 1.59
COL20A1-208ENST00000496810 TMC4Q7Z404 712 aa25.01■■□□□ 1.59
COL20A1-208ENST00000496810 SUPT20HQ8NEM7 779 aa25■■□□□ 1.59
COL20A1-208ENST00000496810 MYH16Q9H6N6 1097 aa25■■□□□ 1.59
COL20A1-208ENST00000496810 YDJCA8MPS7 323 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 CTSWP56202 376 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 RPS8P62241 208 aaKnown RBP24.99■■□□□ 1.59
COL20A1-208ENST00000496810 CXCL9Q07325 125 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 NEXNQ0ZGT2 675 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 UBE3BQ7Z3V4 1068 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 LDHDQ86WU2 507 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 POLLQ9UGP5 575 aa24.99■■□□□ 1.59
COL20A1-208ENST00000496810 NSFL1CQ9UNZ2 370 aaKnown RBP24.99■■□□□ 1.59
COL20A1-208ENST00000496810 F6X3S4 739 aa24.98■■□□□ 1.59
COL20A1-208ENST00000496810 CCDC152Q4G0S7 254 aa24.98■■□□□ 1.59
COL20A1-208ENST00000496810 DNAAF4Q8WXU2 420 aa24.98■■□□□ 1.59
COL20A1-208ENST00000496810 ZNRF3Q9ULT6 936 aa24.98■■□□□ 1.59
COL20A1-208ENST00000496810 EPS15P42566 896 aa24.97■■□□□ 1.59
COL20A1-208ENST00000496810 VPS33BQ9H267 617 aa24.97■■□□□ 1.59
COL20A1-208ENST00000496810 CASP7P55210 303 aa24.96■■□□□ 1.59
COL20A1-208ENST00000496810 GCKRQ14397 625 aa24.96■■□□□ 1.59
COL20A1-208ENST00000496810 GREM2Q9H772 168 aa24.96■■□□□ 1.59
COL20A1-208ENST00000496810 A0A1B0GUL6 1792 aa24.95■■□□□ 1.59
COL20A1-208ENST00000496810 H7C1W4 665 aa24.95■■□□□ 1.58
COL20A1-208ENST00000496810 RAD17O75943 681 aa24.95■■□□□ 1.58
COL20A1-208ENST00000496810 TTLL11Q8NHH1 800 aa24.95■■□□□ 1.58
COL20A1-208ENST00000496810 KLRG1Q96E93 195 aa24.95■■□□□ 1.58
COL20A1-208ENST00000496810 PASKQ96RG2 1323 aa24.94■■□□□ 1.58
COL20A1-208ENST00000496810 PSME4Q14997 1843 aa24.94■■□□□ 1.58
COL20A1-208ENST00000496810 RIMBP2O15034 1052 aa24.94■■□□□ 1.58
COL20A1-208ENST00000496810 HSP90B1P14625 803 aaKnown RBP24.94■■□□□ 1.58
COL20A1-208ENST00000496810 TBC1D16Q8TBP0 767 aa24.94■■□□□ 1.58
COL20A1-208ENST00000496810 DBNDD1Q9H9R9 158 aa24.94■■□□□ 1.58
COL20A1-208ENST00000496810 C6orf229H3BNL8 230 aa24.93■■□□□ 1.58
COL20A1-208ENST00000496810 GMPSP49915 693 aaPredicted RBP24.93■■□□□ 1.58
COL20A1-208ENST00000496810 MAP1SQ66K74 1059 aaPredicted RBP24.93■■□□□ 1.58
COL20A1-208ENST00000496810 ZNF646O15015 1829 aaPredicted RBP24.92■■□□□ 1.58
COL20A1-208ENST00000496810 SHTN1A0MZ66 631 aa24.92■■□□□ 1.58
COL20A1-208ENST00000496810 ITGBL1O95965 494 aaPredicted RBP24.92■■□□□ 1.58
COL20A1-208ENST00000496810 LMOD1P29536 600 aaPredicted RBP24.92■■□□□ 1.58
COL20A1-208ENST00000496810 WASHC4Q2M389 1173 aa24.92■■□□□ 1.58
COL20A1-208ENST00000496810 LINS1Q8NG48 757 aa24.92■■□□□ 1.58
COL20A1-208ENST00000496810 CLEC11AQ9Y240 323 aa24.92■■□□□ 1.58
COL20A1-208ENST00000496810 RTL9Q8NET4 1388 aa24.92■■□□□ 1.58
COL20A1-208ENST00000496810 WTIPA6NIX2 430 aaPredicted RBP24.91■■□□□ 1.58
COL20A1-208ENST00000496810 UFL1O94874 794 aa24.91■■□□□ 1.58
COL20A1-208ENST00000496810 CIAPIN1Q6FI81 312 aa24.91■■□□□ 1.58
COL20A1-208ENST00000496810 KCNQ5Q9NR82 932 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms