RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 GCKRQ14397 625 aa20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 BEND3Q5T5X7 828 aa20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 CC2D2BQ6DHV5 1058 aa20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 PSMD1Q99460 953 aa20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
DNMT3A-215ENST00000496570 BBOX1O75936 387 aa20.58■□□□□ 0.89
DNMT3A-215ENST00000496570 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
DNMT3A-215ENST00000496570 KIF3CO14782 793 aa20.57■□□□□ 0.88
DNMT3A-215ENST00000496570 PDE8AO60658 829 aa20.57■□□□□ 0.88
DNMT3A-215ENST00000496570 DUOX1Q9NRD9 1551 aa20.56■□□□□ 0.88
DNMT3A-215ENST00000496570 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
DNMT3A-215ENST00000496570 NMRK2Q9NPI5 230 aa20.56■□□□□ 0.88
DNMT3A-215ENST00000496570 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
DNMT3A-215ENST00000496570 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
DNMT3A-215ENST00000496570 UBE3BQ7Z3V4 1068 aa20.55■□□□□ 0.88
DNMT3A-215ENST00000496570 BCL2L13Q9BXK5 485 aa20.55■□□□□ 0.88
DNMT3A-215ENST00000496570 MYH3P11055 1940 aa20.55■□□□□ 0.88
DNMT3A-215ENST00000496570 LTBP1Q14766 1721 aa20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 GLTPD2A6NH11 291 aa20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 IARSP41252 1262 aaKnown RBP20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 ALDH1L2Q3SY69 923 aa20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 GRIPAP1Q4V328 841 aa20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 RTFDC1Q9BY42 306 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-215ENST00000496570 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
DNMT3A-215ENST00000496570 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
DNMT3A-215ENST00000496570 CTSWP56202 376 aa20.53■□□□□ 0.88
DNMT3A-215ENST00000496570 TTLL11Q8NHH1 800 aa20.53■□□□□ 0.88
DNMT3A-215ENST00000496570 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
DNMT3A-215ENST00000496570 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
DNMT3A-215ENST00000496570 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
DNMT3A-215ENST00000496570 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
DNMT3A-215ENST00000496570 WDR90Q96KV7 1748 aa20.52■□□□□ 0.88
DNMT3A-215ENST00000496570 KDM2BQ8NHM5 1336 aa20.52■□□□□ 0.87
DNMT3A-215ENST00000496570 POTECB2RU33 542 aa20.51■□□□□ 0.87
DNMT3A-215ENST00000496570 RPS8P62241 208 aaKnown RBP20.51■□□□□ 0.87
DNMT3A-215ENST00000496570 PTPRCP08575 1304 aa20.51■□□□□ 0.87
DNMT3A-215ENST00000496570 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 FZD9O00144 591 aa20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 GREM2Q9H772 168 aa20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
DNMT3A-215ENST00000496570 ALDH1L1O75891 902 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 CSF1RP07333 972 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 MPNDQ8N594 471 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
DNMT3A-215ENST00000496570 DDNO94850 711 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-215ENST00000496570 FOXO4P98177 505 aa20.48■□□□□ 0.87
DNMT3A-215ENST00000496570 DPP8Q6V1X1 898 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-215ENST00000496570 SRCIN1Q9C0H9 1055 aa20.48■□□□□ 0.87
DNMT3A-215ENST00000496570 GRM8O00222 908 aa20.47■□□□□ 0.87
DNMT3A-215ENST00000496570 GPSM2P81274 684 aa20.47■□□□□ 0.87
DNMT3A-215ENST00000496570 AOC3Q16853 763 aa20.47■□□□□ 0.87
DNMT3A-215ENST00000496570 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
DNMT3A-215ENST00000496570 ZBED9Q6R2W3 1325 aa20.47■□□□□ 0.87
DNMT3A-215ENST00000496570 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 DPY19L2Q6NUT2 758 aa20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 TMX4Q9H1E5 349 aaPredicted RBP20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 VPS33BQ9H267 617 aa20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 POLLQ9UGP5 575 aa20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 UTYO14607 1347 aa20.46■□□□□ 0.87
DNMT3A-215ENST00000496570 PPIP5K2O43314 1243 aa20.45■□□□□ 0.86
DNMT3A-215ENST00000496570 LARGE2Q8N3Y3 721 aa20.45■□□□□ 0.86
DNMT3A-215ENST00000496570 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
DNMT3A-215ENST00000496570 NBPF7P0C2Y1 421 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 KIAA2012Q0VF49 1180 aa20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 SUPT20HQ8NEM7 779 aa20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 NOB1Q9ULX3 412 aaKnown RBP20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 NSFL1CQ9UNZ2 370 aaKnown RBP20.44■□□□□ 0.86
DNMT3A-215ENST00000496570 ITGA6P23229 1130 aa20.43■□□□□ 0.86
DNMT3A-215ENST00000496570 JDP2Q8WYK2 163 aa20.43■□□□□ 0.86
DNMT3A-215ENST00000496570 TOMM70O94826 608 aa20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 VEGFAP15692 232 aaPredicted RBP20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 TBC1D16Q8TBP0 767 aa20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 CDC5LQ99459 802 aaKnown RBP20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 BSDC1Q9NW68 430 aaPredicted RBP20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
DNMT3A-215ENST00000496570 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-215ENST00000496570 GPR101Q96P66 508 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-215ENST00000496570 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
DNMT3A-215ENST00000496570 YDJCA8MPS7 323 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 BCAR3O75815 825 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 LMBR1LQ6UX01 489 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 NIM1KQ8IY84 436 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 GPC2Q8N158 579 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 MINPP1Q9UNW1 487 aa20.4■□□□□ 0.86
DNMT3A-215ENST00000496570 SCN4AP35499 1836 aa20.39■□□□□ 0.86
DNMT3A-215ENST00000496570 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
DNMT3A-215ENST00000496570 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.85
DNMT3A-215ENST00000496570 XDHP47989 1333 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms