RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 LINS1Q8NG48 757 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 TNNQ9UQP3 1299 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 SLX4Q8IY92 1834 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 PTPRCP08575 1304 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 KDM2BQ8NHM5 1336 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 CDHR2Q9BYE9 1310 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
SMARCD3-215ENST00000496530 SRCAPQ6ZRS2 3230 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 ADCY9O60503 1353 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 NEURL1BA8MQ27 555 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 FKBP4Q02790 459 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 RASSF7Q02833 373 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 GRAPQ13588 217 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 ATF7IPQ6VMQ6 1270 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 GRAPLQ8TC17 118 aaPredicted RBP10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 FER1L6Q2WGJ9 1857 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 KIF16BQ96L93 1317 aa10.29□□□□□ -0.76
SMARCD3-215ENST00000496530 C1QBPQ07021 282 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 CWF19L2Q2TBE0 894 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 ARHGAP45Q92619 1136 aa10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 SRCIN1Q9C0H9 1055 aa10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 ABCC4O15439 1325 aa10.28□□□□□ -0.76
SMARCD3-215ENST00000496530 SBF1O95248 1867 aa10.27□□□□□ -0.76
SMARCD3-215ENST00000496530 CCDC88AQ3V6T2 1871 aa10.27□□□□□ -0.76
SMARCD3-215ENST00000496530 NFKBIEO00221 500 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 IGKV5-2P06315 115 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 GCKRQ14397 625 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 SP8Q8IXZ3 490 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 CRBNQ96SW2 442 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 CDC5LQ99459 802 aaKnown RBP10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 PSMD1Q99460 953 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 C9orf78Q9NZ63 289 aaPredicted RBP10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.77
SMARCD3-215ENST00000496530 ALDH1L1O75891 902 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 TRIM27P14373 513 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 PDE3AQ14432 1141 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 DPP8Q6V1X1 898 aaPredicted RBP10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 UBE3BQ7Z3V4 1068 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 C16orf71Q8IYS4 520 aaPredicted RBP10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 MPNDQ8N594 471 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 TMEM57Q8N5G2 664 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 JARID2Q92833 1246 aaPredicted RBP10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 VPS33BQ9H267 617 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 MYH3P11055 1940 aa10.26□□□□□ -0.77
SMARCD3-215ENST00000496530 DICER1Q9UPY3 1922 aaKnown RBP10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 H7C1W4 665 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 IGHMBP2P38935 993 aaKnown RBP10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 IARSP41252 1262 aaKnown RBP10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 CTSWP56202 376 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 BEND3Q5T5X7 828 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
SMARCD3-215ENST00000496530 RLBP1P12271 317 aa10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 CCT4P50991 539 aaKnown RBP10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 RPS8P62241 208 aaKnown RBP10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 EYA3Q99504 573 aa10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 PLA2G12BQ9BX93 195 aa10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 ZNF277Q9NRM2 450 aaPredicted RBP10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
SMARCD3-215ENST00000496530 ANKRD18BA2A2Z9 1011 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 GLTPD2A6NH11 291 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 G3V3G9 751 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 GRM8O00222 908 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 PPIP5K2O43314 1243 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 TAF7LQ5H9L4 462 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 NIM1KQ8IY84 436 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 CELF1Q92879 486 aaKnown RBP10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
SMARCD3-215ENST00000496530 IFIT5Q13325 482 aaKnown RBP10.22□□□□□ -0.77
SMARCD3-215ENST00000496530 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
SMARCD3-215ENST00000496530 INTS3Q68E01 1043 aaKnown RBP10.22□□□□□ -0.77
SMARCD3-215ENST00000496530 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
SMARCD3-215ENST00000496530 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms