RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 CELF1Q92879 486 aaKnown RBP22.43■■□□□ 1.18
RHBDD3-207ENST00000496342 KIF3CO14782 793 aa22.42■■□□□ 1.18
RHBDD3-207ENST00000496342 RTKN2Q8IZC4 609 aa22.42■■□□□ 1.18
RHBDD3-207ENST00000496342 LTBP1Q14766 1721 aa22.42■■□□□ 1.18
RHBDD3-207ENST00000496342 UBE3BQ7Z3V4 1068 aa22.41■■□□□ 1.18
RHBDD3-207ENST00000496342 MRPL50Q8N5N7 158 aaKnown RBP22.41■■□□□ 1.18
RHBDD3-207ENST00000496342 SSH1Q8WYL5 1049 aa22.41■■□□□ 1.18
RHBDD3-207ENST00000496342 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
RHBDD3-207ENST00000496342 ATP6V0A2Q9Y487 856 aa22.41■■□□□ 1.18
RHBDD3-207ENST00000496342 CDHR2Q9BYE9 1310 aa22.4■■□□□ 1.18
RHBDD3-207ENST00000496342 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
RHBDD3-207ENST00000496342 WDR90Q96KV7 1748 aa22.4■■□□□ 1.18
RHBDD3-207ENST00000496342 ZC3H4Q9UPT8 1303 aaKnown RBP22.39■■□□□ 1.18
RHBDD3-207ENST00000496342 PDE8AO60658 829 aa22.39■■□□□ 1.17
RHBDD3-207ENST00000496342 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
RHBDD3-207ENST00000496342 GCKRQ14397 625 aa22.39■■□□□ 1.17
RHBDD3-207ENST00000496342 ZNF541Q9H0D2 1346 aa22.38■■□□□ 1.17
RHBDD3-207ENST00000496342 BEND3Q5T5X7 828 aa22.38■■□□□ 1.17
RHBDD3-207ENST00000496342 LINS1Q8NG48 757 aa22.38■■□□□ 1.17
RHBDD3-207ENST00000496342 PSMD1Q99460 953 aa22.38■■□□□ 1.17
RHBDD3-207ENST00000496342 H7C1W4 665 aa22.37■■□□□ 1.17
RHBDD3-207ENST00000496342 CASP7P55210 303 aa22.37■■□□□ 1.17
RHBDD3-207ENST00000496342 CC2D2BQ6DHV5 1058 aa22.37■■□□□ 1.17
RHBDD3-207ENST00000496342 SLC4A10Q6U841 1118 aa22.37■■□□□ 1.17
RHBDD3-207ENST00000496342 RRAGCQ9HB90 399 aa22.37■■□□□ 1.17
RHBDD3-207ENST00000496342 KDM2BQ8NHM5 1336 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 GLTPD2A6NH11 291 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 BBOX1O75936 387 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 CTSWP56202 376 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 C1QTNF8P60827 252 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
RHBDD3-207ENST00000496342 A0A1B0GUL6 1792 aa22.35■■□□□ 1.17
RHBDD3-207ENST00000496342 DDNO94850 711 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-207ENST00000496342 AOC3Q16853 763 aa22.34■■□□□ 1.17
RHBDD3-207ENST00000496342 CCDC152Q4G0S7 254 aa22.34■■□□□ 1.17
RHBDD3-207ENST00000496342 DPP8Q6V1X1 898 aaPredicted RBP22.33■■□□□ 1.17
RHBDD3-207ENST00000496342 MPNDQ8N594 471 aa22.33■■□□□ 1.17
RHBDD3-207ENST00000496342 TTLL11Q8NHH1 800 aa22.33■■□□□ 1.17
RHBDD3-207ENST00000496342 GREM2Q9H772 168 aa22.33■■□□□ 1.17
RHBDD3-207ENST00000496342 SMC4Q9NTJ3 1288 aa22.33■■□□□ 1.17
RHBDD3-207ENST00000496342 PPIP5K2O43314 1243 aa22.32■■□□□ 1.16
RHBDD3-207ENST00000496342 RPS8P62241 208 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-207ENST00000496342 LARGE2Q8N3Y3 721 aa22.32■■□□□ 1.16
RHBDD3-207ENST00000496342 GPR101Q96P66 508 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-207ENST00000496342 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-207ENST00000496342 SCN4AP35499 1836 aa22.31■■□□□ 1.16
RHBDD3-207ENST00000496342 POTECB2RU33 542 aa22.31■■□□□ 1.16
RHBDD3-207ENST00000496342 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
RHBDD3-207ENST00000496342 GPSM2P81274 684 aa22.31■■□□□ 1.16
RHBDD3-207ENST00000496342 FAM161AQ3B820 660 aa22.3■■□□□ 1.16
RHBDD3-207ENST00000496342 ALDH1L2Q3SY69 923 aa22.3■■□□□ 1.16
RHBDD3-207ENST00000496342 RTFDC1Q9BY42 306 aaPredicted RBP22.3■■□□□ 1.16
RHBDD3-207ENST00000496342 FZD9O00144 591 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 GRIPAP1Q4V328 841 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 DPY19L2Q6NUT2 758 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 TMC4Q7Z404 712 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 PLA2G12BQ9BX93 195 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 NSFL1CQ9UNZ2 370 aaKnown RBP22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 PTPRCP08575 1304 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 SCN9AQ15858 1988 aa22.29■■□□□ 1.16
RHBDD3-207ENST00000496342 EPHA10Q5JZY3 1008 aa22.28■■□□□ 1.16
RHBDD3-207ENST00000496342 JDP2Q8WYK2 163 aa22.28■■□□□ 1.16
RHBDD3-207ENST00000496342 GRM8O00222 908 aa22.27■■□□□ 1.16
RHBDD3-207ENST00000496342 ALDH1L1O75891 902 aa22.27■■□□□ 1.16
RHBDD3-207ENST00000496342 ANKRD18AQ8IVF6 992 aa22.27■■□□□ 1.16
RHBDD3-207ENST00000496342 NIM1KQ8IY84 436 aa22.27■■□□□ 1.16
RHBDD3-207ENST00000496342 POLLQ9UGP5 575 aa22.27■■□□□ 1.16
RHBDD3-207ENST00000496342 RTL9Q8NET4 1388 aa22.26■■□□□ 1.15
RHBDD3-207ENST00000496342 RARSP54136 660 aaKnown RBP22.26■■□□□ 1.15
RHBDD3-207ENST00000496342 FOXO4P98177 505 aa22.26■■□□□ 1.15
RHBDD3-207ENST00000496342 SUPT20HQ8NEM7 779 aa22.26■■□□□ 1.15
RHBDD3-207ENST00000496342 RIMBP2O15034 1052 aa22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 ITGA6P23229 1130 aa22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 C16orf71Q8IYS4 520 aaPredicted RBP22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 SUCLG2Q96I99 432 aa22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 C9orf78Q9NZ63 289 aaPredicted RBP22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 GJA3Q9Y6H8 435 aa22.25■■□□□ 1.15
RHBDD3-207ENST00000496342 WTIPA6NIX2 430 aaPredicted RBP22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 C6orf229H3BNL8 230 aa22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 TOMM70O94826 608 aa22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 CSF1RP07333 972 aa22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 NBPF7P0C2Y1 421 aaPredicted RBP22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 KIAA2012Q0VF49 1180 aa22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 CDC5LQ99459 802 aaKnown RBP22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 CHMP3Q9Y3E7 222 aa22.24■■□□□ 1.15
RHBDD3-207ENST00000496342 PSME4Q14997 1843 aa22.23■■□□□ 1.15
RHBDD3-207ENST00000496342 UFL1O94874 794 aa22.23■■□□□ 1.15
RHBDD3-207ENST00000496342 EIF6P56537 245 aaKnown RBP22.23■■□□□ 1.15
RHBDD3-207ENST00000496342 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
RHBDD3-207ENST00000496342 ZBED9Q6R2W3 1325 aa22.23■■□□□ 1.15
RHBDD3-207ENST00000496342 YDJCA8MPS7 323 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 POTEIP0CG38 1075 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 POTEJP0CG39 1038 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 KAZALD1Q96I82 304 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 DBNDD1Q9H9R9 158 aa22.22■■□□□ 1.15
RHBDD3-207ENST00000496342 ANKIB1Q9P2G1 1089 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms