RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 UBE3BQ7Z3V4 1068 aa25.44■■□□□ 1.66
COL9A2-210ENST00000495948 ZC3H4Q9UPT8 1303 aaKnown RBP25.43■■□□□ 1.66
COL9A2-210ENST00000495948 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
COL9A2-210ENST00000495948 RTKN2Q8IZC4 609 aa25.43■■□□□ 1.66
COL9A2-210ENST00000495948 RNF181Q9P0P0 153 aa25.43■■□□□ 1.66
COL9A2-210ENST00000495948 COL4A1P02462 1669 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 CASP7P55210 303 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 CTSWP56202 376 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 CCDC152Q4G0S7 254 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 GRIPAP1Q4V328 841 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 TMC4Q7Z404 712 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 ZNF784Q8NCA9 323 aaPredicted RBP25.42■■□□□ 1.66
COL9A2-210ENST00000495948 JARID2Q92833 1246 aaPredicted RBP25.42■■□□□ 1.66
COL9A2-210ENST00000495948 PLA2G12BQ9BX93 195 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 SRCIN1Q9C0H9 1055 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 RTL9Q8NET4 1388 aa25.42■■□□□ 1.66
COL9A2-210ENST00000495948 DICER1Q9UPY3 1922 aaKnown RBP25.41■■□□□ 1.66
COL9A2-210ENST00000495948 BBOX1O75936 387 aa25.41■■□□□ 1.66
COL9A2-210ENST00000495948 PRELPP51888 382 aa25.41■■□□□ 1.66
COL9A2-210ENST00000495948 FKBP4Q02790 459 aaKnown RBP eCLIP25.41■■□□□ 1.66
COL9A2-210ENST00000495948 SLC4A10Q6U841 1118 aa25.41■■□□□ 1.66
COL9A2-210ENST00000495948 OLFM4Q6UX06 510 aa25.41■■□□□ 1.66
COL9A2-210ENST00000495948 ATP6V0A2Q9Y487 856 aa25.41■■□□□ 1.66
COL9A2-210ENST00000495948 TAF1P21675 1872 aa25.4■■□□□ 1.66
COL9A2-210ENST00000495948 CCDC88AQ3V6T2 1871 aa25.39■■□□□ 1.66
COL9A2-210ENST00000495948 PSMD1Q99460 953 aa25.39■■□□□ 1.66
COL9A2-210ENST00000495948 GRM8O00222 908 aa25.38■■□□□ 1.65
COL9A2-210ENST00000495948 CELF1Q92879 486 aaKnown RBP25.37■■□□□ 1.65
COL9A2-210ENST00000495948 TMX4Q9H1E5 349 aaPredicted RBP25.37■■□□□ 1.65
COL9A2-210ENST00000495948 NOB1Q9ULX3 412 aaKnown RBP25.37■■□□□ 1.65
COL9A2-210ENST00000495948 DUOX1Q9NRD9 1551 aa25.36■■□□□ 1.65
COL9A2-210ENST00000495948 SLC51AQ86UW1 340 aa25.36■■□□□ 1.65
COL9A2-210ENST00000495948 SP8Q8IXZ3 490 aa25.36■■□□□ 1.65
COL9A2-210ENST00000495948 TTLL11Q8NHH1 800 aa25.36■■□□□ 1.65
COL9A2-210ENST00000495948 API5Q9BZZ5 524 aaKnown RBP25.36■■□□□ 1.65
COL9A2-210ENST00000495948 LTBP1Q14766 1721 aa25.36■■□□□ 1.65
COL9A2-210ENST00000495948 ARHGAP45Q92619 1136 aa25.35■■□□□ 1.65
COL9A2-210ENST00000495948 UTYO14607 1347 aa25.35■■□□□ 1.65
COL9A2-210ENST00000495948 SEC31BQ9NQW1 1179 aa25.34■■□□□ 1.65
COL9A2-210ENST00000495948 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-210ENST00000495948 RPS8P62241 208 aaKnown RBP25.33■■□□□ 1.65
COL9A2-210ENST00000495948 CDC5LQ99459 802 aaKnown RBP25.33■■□□□ 1.65
COL9A2-210ENST00000495948 CSF1RP07333 972 aa25.32■■□□□ 1.64
COL9A2-210ENST00000495948 CCDC85AQ96PX6 553 aaPredicted RBP25.32■■□□□ 1.64
COL9A2-210ENST00000495948 GREM2Q9H772 168 aa25.32■■□□□ 1.64
COL9A2-210ENST00000495948 ZNF277Q9NRM2 450 aaPredicted RBP25.32■■□□□ 1.64
COL9A2-210ENST00000495948 IARSP41252 1262 aaKnown RBP25.31■■□□□ 1.64
COL9A2-210ENST00000495948 CCT4P50991 539 aaKnown RBP25.31■■□□□ 1.64
COL9A2-210ENST00000495948 RTFDC1Q9BY42 306 aaPredicted RBP25.31■■□□□ 1.64
COL9A2-210ENST00000495948 SPEF2Q9C093 1822 aa25.3■■□□□ 1.64
COL9A2-210ENST00000495948 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
COL9A2-210ENST00000495948 ANKRD18AQ8IVF6 992 aa25.3■■□□□ 1.64
COL9A2-210ENST00000495948 IPO8O15397 1037 aaKnown RBP25.29■■□□□ 1.64
COL9A2-210ENST00000495948 BCAR3O75815 825 aa25.29■■□□□ 1.64
COL9A2-210ENST00000495948 FOXO4P98177 505 aa25.29■■□□□ 1.64
COL9A2-210ENST00000495948 DPP8Q6V1X1 898 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-210ENST00000495948 SUPT20HQ8NEM7 779 aa25.29■■□□□ 1.64
COL9A2-210ENST00000495948 COL4A5P29400 1685 aa25.29■■□□□ 1.64
COL9A2-210ENST00000495948 MPNDQ8N594 471 aa25.28■■□□□ 1.64
COL9A2-210ENST00000495948 VPS33BQ9H267 617 aa25.28■■□□□ 1.64
COL9A2-210ENST00000495948 GPBP1L1Q9HC44 474 aaPredicted RBP25.28■■□□□ 1.64
COL9A2-210ENST00000495948 NBPF7P0C2Y1 421 aaPredicted RBP25.27■■□□□ 1.64
COL9A2-210ENST00000495948 ITGA6P23229 1130 aa25.27■■□□□ 1.64
COL9A2-210ENST00000495948 SUCLG2Q96I99 432 aa25.27■■□□□ 1.64
COL9A2-210ENST00000495948 TRIM27P14373 513 aa25.26■■□□□ 1.63
COL9A2-210ENST00000495948 ATF7IPQ6VMQ6 1270 aa25.26■■□□□ 1.63
COL9A2-210ENST00000495948 ZNF526Q8TF50 670 aaPredicted RBP25.26■■□□□ 1.63
COL9A2-210ENST00000495948 KDM2BQ8NHM5 1336 aa25.26■■□□□ 1.63
COL9A2-210ENST00000495948 EPHA10Q5JZY3 1008 aa25.25■■□□□ 1.63
COL9A2-210ENST00000495948 USP44Q9H0E7 712 aa25.25■■□□□ 1.63
COL9A2-210ENST00000495948 BSDC1Q9NW68 430 aaPredicted RBP25.25■■□□□ 1.63
COL9A2-210ENST00000495948 PODXL2Q9NZ53 605 aa25.25■■□□□ 1.63
COL9A2-210ENST00000495948 WDR90Q96KV7 1748 aa25.24■■□□□ 1.63
COL9A2-210ENST00000495948 IGHMBP2P38935 993 aaKnown RBP25.24■■□□□ 1.63
COL9A2-210ENST00000495948 FRAT1Q92837 279 aaPredicted RBP25.24■■□□□ 1.63
COL9A2-210ENST00000495948 KAZALD1Q96I82 304 aa25.24■■□□□ 1.63
COL9A2-210ENST00000495948 ANKRD18BA2A2Z9 1011 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 GLTPD2A6NH11 291 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 PPIP5K2O43314 1243 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 GPSM2P81274 684 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 RABL6Q3YEC7 729 aaPredicted RBP25.23■■□□□ 1.63
COL9A2-210ENST00000495948 ZKSCAN2Q63HK3 967 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 INTS3Q68E01 1043 aaKnown RBP25.23■■□□□ 1.63
COL9A2-210ENST00000495948 LMBR1LQ6UX01 489 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 LARGE2Q8N3Y3 721 aa25.23■■□□□ 1.63
COL9A2-210ENST00000495948 XDHP47989 1333 aa25.22■■□□□ 1.63
COL9A2-210ENST00000495948 KIAA2012Q0VF49 1180 aa25.22■■□□□ 1.63
COL9A2-210ENST00000495948 IFIT5Q13325 482 aaKnown RBP25.22■■□□□ 1.63
COL9A2-210ENST00000495948 AOC3Q16853 763 aa25.22■■□□□ 1.63
COL9A2-210ENST00000495948 JDP2Q8WYK2 163 aa25.22■■□□□ 1.63
COL9A2-210ENST00000495948 NSFL1CQ9UNZ2 370 aaKnown RBP25.22■■□□□ 1.63
COL9A2-210ENST00000495948 CHMP3Q9Y3E7 222 aa25.22■■□□□ 1.63
COL9A2-210ENST00000495948 A0A1B0GUL6 1792 aa25.21■■□□□ 1.63
COL9A2-210ENST00000495948 FZD9O00144 591 aa25.21■■□□□ 1.63
COL9A2-210ENST00000495948 BICC1Q9H694 974 aaKnown RBP25.21■■□□□ 1.63
COL9A2-210ENST00000495948 CCDC57Q2TAC2 916 aa25.2■■□□□ 1.62
COL9A2-210ENST00000495948 DPY19L2Q6NUT2 758 aa25.2■■□□□ 1.62
COL9A2-210ENST00000495948 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
COL9A2-210ENST00000495948 UBTFL1P0CB47 393 aaPredicted RBP25.19■■□□□ 1.62
COL9A2-210ENST00000495948 NIM1KQ8IY84 436 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms