RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 TSPYL6Q8N831 410 aa23.41■■□□□ 1.34
YIPF4-204ENST00000495355 SF3B3Q15393 1217 aaKnown RBP23.4■■□□□ 1.34
YIPF4-204ENST00000495355 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
YIPF4-204ENST00000495355 NIM1KQ8IY84 436 aa23.4■■□□□ 1.34
YIPF4-204ENST00000495355 CELF1Q92879 486 aaKnown RBP23.4■■□□□ 1.34
YIPF4-204ENST00000495355 MKRN1Q9UHC7 482 aaKnown RBP23.4■■□□□ 1.34
YIPF4-204ENST00000495355 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
YIPF4-204ENST00000495355 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
YIPF4-204ENST00000495355 PNMA8AQ86V59 439 aaPredicted RBP23.39■■□□□ 1.33
YIPF4-204ENST00000495355 MPNDQ8N594 471 aa23.39■■□□□ 1.33
YIPF4-204ENST00000495355 VPS33BQ9H267 617 aa23.39■■□□□ 1.33
YIPF4-204ENST00000495355 CALD1Q05682 793 aaKnown RBP23.38■■□□□ 1.33
YIPF4-204ENST00000495355 KIAA2012Q0VF49 1180 aa23.38■■□□□ 1.33
YIPF4-204ENST00000495355 COL13A1Q5TAT6 717 aaPredicted RBP23.38■■□□□ 1.33
YIPF4-204ENST00000495355 CNTNAP1P78357 1384 aa23.38■■□□□ 1.33
YIPF4-204ENST00000495355 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
YIPF4-204ENST00000495355 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
YIPF4-204ENST00000495355 CXCL9Q07325 125 aa23.37■■□□□ 1.33
YIPF4-204ENST00000495355 CNTROBQ8N137 903 aa23.37■■□□□ 1.33
YIPF4-204ENST00000495355 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
YIPF4-204ENST00000495355 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
YIPF4-204ENST00000495355 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
YIPF4-204ENST00000495355 ZNRF3Q9ULT6 936 aa23.36■■□□□ 1.33
YIPF4-204ENST00000495355 YDJCA8MPS7 323 aa23.35■■□□□ 1.33
YIPF4-204ENST00000495355 IRS4O14654 1257 aaPredicted RBP23.35■■□□□ 1.33
YIPF4-204ENST00000495355 FMR1Q06787 632 aaKnown RBP eCLIP23.35■■□□□ 1.33
YIPF4-204ENST00000495355 GOLGA2Q08379 1002 aa23.35■■□□□ 1.33
YIPF4-204ENST00000495355 RIC3Q7Z5B4 369 aa23.35■■□□□ 1.33
YIPF4-204ENST00000495355 MYD88Q99836 296 aa23.35■■□□□ 1.33
YIPF4-204ENST00000495355 CCDC27Q2M243 656 aa23.34■■□□□ 1.33
YIPF4-204ENST00000495355 WWC1Q8IX03 1113 aa23.34■■□□□ 1.33
YIPF4-204ENST00000495355 ZBTB38Q8NAP3 1195 aaPredicted RBP23.34■■□□□ 1.33
YIPF4-204ENST00000495355 TMX4Q9H1E5 349 aaPredicted RBP23.34■■□□□ 1.33
YIPF4-204ENST00000495355 TMEM88BA6NKF7 163 aa23.33■■□□□ 1.33
YIPF4-204ENST00000495355 LMOD1P29536 600 aaPredicted RBP23.33■■□□□ 1.33
YIPF4-204ENST00000495355 TMC4Q7Z404 712 aa23.33■■□□□ 1.33
YIPF4-204ENST00000495355 GPRC5DQ9NZD1 345 aa23.33■■□□□ 1.33
YIPF4-204ENST00000495355 GMPSP49915 693 aaPredicted RBP23.32■■□□□ 1.32
YIPF4-204ENST00000495355 JARID2Q92833 1246 aaPredicted RBP23.32■■□□□ 1.32
YIPF4-204ENST00000495355 GPSM2P81274 684 aa23.31■■□□□ 1.32
YIPF4-204ENST00000495355 CCDC30Q5VVM6 783 aa23.31■■□□□ 1.32
YIPF4-204ENST00000495355 USP50Q70EL3 339 aaPredicted RBP23.31■■□□□ 1.32
YIPF4-204ENST00000495355 METTL22Q9BUU2 404 aaPredicted RBP23.31■■□□□ 1.32
YIPF4-204ENST00000495355 SEC31BQ9NQW1 1179 aa23.31■■□□□ 1.32
YIPF4-204ENST00000495355 POLLQ9UGP5 575 aa23.31■■□□□ 1.32
YIPF4-204ENST00000495355 SHTN1A0MZ66 631 aa23.3■■□□□ 1.32
YIPF4-204ENST00000495355 RAD17O75943 681 aa23.3■■□□□ 1.32
YIPF4-204ENST00000495355 PCCAP05165 728 aaPredicted RBP23.3■■□□□ 1.32
YIPF4-204ENST00000495355 VEGFBP49765 207 aa23.3■■□□□ 1.32
YIPF4-204ENST00000495355 CIAPIN1Q6FI81 312 aa23.3■■□□□ 1.32
YIPF4-204ENST00000495355 CCDC191Q8NCU4 936 aa23.3■■□□□ 1.32
YIPF4-204ENST00000495355 IGKV5-2P06315 115 aa23.29■■□□□ 1.32
YIPF4-204ENST00000495355 GPR101Q96P66 508 aaPredicted RBP23.29■■□□□ 1.32
YIPF4-204ENST00000495355 ADARB2Q9NS39 739 aaKnown RBP23.29■■□□□ 1.32
YIPF4-204ENST00000495355 RASSF10A6NK89 507 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 TRAF5O00463 557 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 G2E3Q7L622 706 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 NSFL1CQ9UNZ2 370 aaKnown RBP23.28■■□□□ 1.32
YIPF4-204ENST00000495355 MAP3K2Q9Y2U5 619 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 SCN9AQ15858 1988 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 TRPM7Q96QT4 1865 aa23.28■■□□□ 1.32
YIPF4-204ENST00000495355 HIRAP54198 1017 aaPredicted RBP23.27■■□□□ 1.32
YIPF4-204ENST00000495355 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
YIPF4-204ENST00000495355 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
YIPF4-204ENST00000495355 CWC25Q9NXE8 425 aaPredicted RBP23.27■■□□□ 1.32
YIPF4-204ENST00000495355 PI4KAP2A4QPH2 592 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 PI4KAP1Q8N8J0 262 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 TRPM4Q8TD43 1214 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 DBNDD1Q9H9R9 158 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 IL16Q14005 1332 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 CDHR2Q9BYE9 1310 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
YIPF4-204ENST00000495355 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
YIPF4-204ENST00000495355 WASHC4Q2M389 1173 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
YIPF4-204ENST00000495355 NCBP3Q53F19 620 aaKnown RBP23.25■■□□□ 1.31
YIPF4-204ENST00000495355 CST9Q5W186 159 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 KSR2Q6VAB6 950 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 KCNQ5Q9NR82 932 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 THSD7BQ9C0I4 1608 aa23.25■■□□□ 1.31
YIPF4-204ENST00000495355 RIMBP2O15034 1052 aa23.24■■□□□ 1.31
YIPF4-204ENST00000495355 PDE8AO60658 829 aa23.24■■□□□ 1.31
YIPF4-204ENST00000495355 ZEB1P37275 1124 aaPredicted RBP23.24■■□□□ 1.31
YIPF4-204ENST00000495355 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
YIPF4-204ENST00000495355 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
YIPF4-204ENST00000495355 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
YIPF4-204ENST00000495355 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
YIPF4-204ENST00000495355 FANCIQ9NVI1 1328 aa23.24■■□□□ 1.31
YIPF4-204ENST00000495355 PSMD14O00487 310 aa23.23■■□□□ 1.31
YIPF4-204ENST00000495355 DDX58O95786 925 aaKnown RBP23.23■■□□□ 1.31
YIPF4-204ENST00000495355 TNIP1Q15025 636 aa23.23■■□□□ 1.31
YIPF4-204ENST00000495355 MYH3P11055 1940 aa23.23■■□□□ 1.31
YIPF4-204ENST00000495355 C6orf229H3BNL8 230 aa23.22■■□□□ 1.31
YIPF4-204ENST00000495355 FOXN1O15353 648 aa23.22■■□□□ 1.31
YIPF4-204ENST00000495355 MAPK8IP2Q13387 824 aaPredicted RBP23.22■■□□□ 1.31
YIPF4-204ENST00000495355 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
YIPF4-204ENST00000495355 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
YIPF4-204ENST00000495355 ECE2O60344 883 aa23.21■■□□□ 1.31
YIPF4-204ENST00000495355 DEFB115Q30KQ5 88 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms