RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 HMGB2P26583 209 aaKnown RBP8.36□□□□□ -1.07
MSH5-217ENST00000494458 G3BP1Q13283 466 aaKnown RBP eCLIP8.36□□□□□ -1.07
MSH5-217ENST00000494458 KRT27Q7Z3Y8 459 aa8.36□□□□□ -1.07
MSH5-217ENST00000494458 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
MSH5-217ENST00000494458 EAF2Q96CJ1 260 aaPredicted RBP8.36□□□□□ -1.07
MSH5-217ENST00000494458 BCL2L12Q9HB09 334 aa8.36□□□□□ -1.07
MSH5-217ENST00000494458 ZBTB47Q9UFB7 747 aaPredicted RBP8.36□□□□□ -1.07
MSH5-217ENST00000494458 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 PLSCR1O15162 318 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 SLC10A5Q5PT55 438 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 CLASRPQ8N2M8 674 aaKnown RBP8.35□□□□□ -1.07
MSH5-217ENST00000494458 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
MSH5-217ENST00000494458 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 RGS17Q9UGC6 210 aaPredicted RBP8.35□□□□□ -1.07
MSH5-217ENST00000494458 NARFQ9UHQ1 456 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 TBC1D2BQ9UPU7 963 aa8.35□□□□□ -1.07
MSH5-217ENST00000494458 EYA2O00167 538 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 PDE8AO60658 829 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 GLRX3O76003 335 aaKnown RBP8.34□□□□□ -1.07
MSH5-217ENST00000494458 NTSR2O95665 410 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 IL15P40933 162 aaPredicted RBP8.34□□□□□ -1.07
MSH5-217ENST00000494458 SUSD4Q5VX71 490 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 PROM2Q8N271 834 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
MSH5-217ENST00000494458 FAM89AQ96GI7 184 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 IL1RAPL2Q9NP60 686 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 BCORQ6W2J9 1755 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
MSH5-217ENST00000494458 TAF1LQ8IZX4 1826 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
MSH5-217ENST00000494458 ATP5JP18859 108 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 CHMLP26374 656 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 CTSWP56202 376 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
MSH5-217ENST00000494458 SYNE4Q8N205 404 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 FBXO41Q8TF61 875 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 KIF2CQ99661 725 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 UTP14AQ9BVJ6 771 aaKnown RBP8.33□□□□□ -1.08
MSH5-217ENST00000494458 USP26Q9BXU7 913 aa8.33□□□□□ -1.08
MSH5-217ENST00000494458 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
MSH5-217ENST00000494458 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
MSH5-217ENST00000494458 SH3TC1Q8TE82 1336 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 BRWD3Q6RI45 1802 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 APBB1O00213 710 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 ERC2O15083 957 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 HSP90B1P14625 803 aaKnown RBP8.32□□□□□ -1.08
MSH5-217ENST00000494458 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
MSH5-217ENST00000494458 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
MSH5-217ENST00000494458 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 AMIGO3Q86WK7 504 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
MSH5-217ENST00000494458 C22orf23Q9BZE7 217 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 ZNF652Q9Y2D9 606 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 LRP5O75197 1615 aa8.32□□□□□ -1.08
MSH5-217ENST00000494458 SCN7AQ01118 1682 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 IFIT2P09913 472 aaKnown RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 GPTP24298 496 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 TFCP2Q12800 502 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 LRRC24Q50LG9 513 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 NPM2Q86SE8 214 aaKnown RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 AACSQ86V21 672 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 IL27Q8NEV9 243 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 DDRGK1Q96HY6 314 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 DBNLQ9UJU6 430 aaKnown RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
MSH5-217ENST00000494458 C4BP0C0L5 1744 aa8.31□□□□□ -1.08
MSH5-217ENST00000494458 RIC1Q4ADV7 1423 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 A0A0G2JS52 829 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 C7P10643 843 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 ITGA6P23229 1130 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 SSFA2P28290 1259 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 RXRBP28702 533 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 KCNQ4P56696 695 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 MYT1Q01538 1121 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
MSH5-217ENST00000494458 OS9Q13438 667 aaPredicted RBP8.3□□□□□ -1.08
MSH5-217ENST00000494458 TSHZ3Q63HK5 1081 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 EVI5LQ96CN4 794 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 ESYT1Q9BSJ8 1104 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 PUS3Q9BZE2 481 aaKnown RBP8.3□□□□□ -1.08
MSH5-217ENST00000494458 SIL1Q9H173 461 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 GREM2Q9H772 168 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 UPF2Q9HAU5 1272 aaKnown RBP8.3□□□□□ -1.08
MSH5-217ENST00000494458 NIP7Q9Y221 180 aaKnown RBP eCLIP8.3□□□□□ -1.08
MSH5-217ENST00000494458 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms