RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 ZNF622Q969S3 477 aaKnown RBP eCLIP10.21□□□□□ -0.77
ABCD4-216ENST00000493752 KAZALD1Q96I82 304 aa10.21□□□□□ -0.77
ABCD4-216ENST00000493752 SUCLG2Q96I99 432 aa10.21□□□□□ -0.77
ABCD4-216ENST00000493752 MEIS3Q99687 375 aa10.21□□□□□ -0.77
ABCD4-216ENST00000493752 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
ABCD4-216ENST00000493752 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.78
ABCD4-216ENST00000493752 BBOX1O75936 387 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 GNAI2P04899 355 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 RABL6Q3YEC7 729 aaPredicted RBP10.2□□□□□ -0.78
ABCD4-216ENST00000493752 EPHA10Q5JZY3 1008 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 LMBR1LQ6UX01 489 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 TTLL6Q8N841 843 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 NRXN2Q9P2S2 1712 aa10.2□□□□□ -0.78
ABCD4-216ENST00000493752 RPS8P62241 208 aaKnown RBP10.19□□□□□ -0.78
ABCD4-216ENST00000493752 DALRD3Q5D0E6 543 aaKnown RBP10.19□□□□□ -0.78
ABCD4-216ENST00000493752 ANKRD44Q8N8A2 993 aa10.19□□□□□ -0.78
ABCD4-216ENST00000493752 BICC1Q9H694 974 aaKnown RBP10.19□□□□□ -0.78
ABCD4-216ENST00000493752 ZBTB40Q9NUA8 1239 aa10.19□□□□□ -0.78
ABCD4-216ENST00000493752 LRRFIP2Q9Y608 721 aaKnown RBP10.19□□□□□ -0.78
ABCD4-216ENST00000493752 LRP5O75197 1615 aa10.18□□□□□ -0.78
ABCD4-216ENST00000493752 RTL9Q8NET4 1388 aa10.18□□□□□ -0.78
ABCD4-216ENST00000493752 IFIT5Q13325 482 aaKnown RBP10.18□□□□□ -0.78
ABCD4-216ENST00000493752 GRAPQ13588 217 aa10.18□□□□□ -0.78
ABCD4-216ENST00000493752 GRAPLQ8TC17 118 aaPredicted RBP10.18□□□□□ -0.78
ABCD4-216ENST00000493752 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
ABCD4-216ENST00000493752 CDC5LQ99459 802 aaKnown RBP10.18□□□□□ -0.78
ABCD4-216ENST00000493752 GREM2Q9H772 168 aa10.18□□□□□ -0.78
ABCD4-216ENST00000493752 ANKRD18BA2A2Z9 1011 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 ITGA6P23229 1130 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 MTX1Q13505 466 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 AAMPQ13685 434 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 CCDC57Q2TAC2 916 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 PRPF40BQ6NWY9 871 aaKnown RBP10.17□□□□□ -0.78
ABCD4-216ENST00000493752 TMC4Q7Z404 712 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 SEC31BQ9NQW1 1179 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 CHMP3Q9Y3E7 222 aa10.17□□□□□ -0.78
ABCD4-216ENST00000493752 ANKRD36CQ5JPF3 1778 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 ATP8B2P98198 1209 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 ANKRD18AQ8IVF6 992 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 RPAP2Q8IXW5 612 aaPredicted RBP10.16□□□□□ -0.78
ABCD4-216ENST00000493752 SP8Q8IXZ3 490 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 CELF1Q92879 486 aaKnown RBP10.16□□□□□ -0.78
ABCD4-216ENST00000493752 CRBNQ96SW2 442 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 TMX4Q9H1E5 349 aaPredicted RBP10.16□□□□□ -0.78
ABCD4-216ENST00000493752 BSDC1Q9NW68 430 aaPredicted RBP10.16□□□□□ -0.78
ABCD4-216ENST00000493752 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
ABCD4-216ENST00000493752 AFDNP55196 1824 aaKnown RBP10.15□□□□□ -0.78
ABCD4-216ENST00000493752 IGHMBP2P38935 993 aaKnown RBP10.15□□□□□ -0.78
ABCD4-216ENST00000493752 SOGA3Q5TF21 947 aa10.15□□□□□ -0.78
ABCD4-216ENST00000493752 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
ABCD4-216ENST00000493752 SRGAP3O43295 1099 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 C21orf2O43822 256 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 GRIN3BO60391 1043 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 RFX5P48382 616 aaPredicted RBP10.14□□□□□ -0.79
ABCD4-216ENST00000493752 GPR162Q16538 588 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 TAF7LQ5H9L4 462 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 RTKN2Q8IZC4 609 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 SSH3Q8TE77 659 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 MPHOSPH8Q99549 860 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
ABCD4-216ENST00000493752 KIF13BQ9NQT8 1826 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 YBX3P16989 372 aaKnown RBP eCLIP10.13□□□□□ -0.79
ABCD4-216ENST00000493752 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
ABCD4-216ENST00000493752 POLA2Q14181 598 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 CEP85Q6P2H3 762 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 LDHAL6AQ6ZMR3 332 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
ABCD4-216ENST00000493752 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
ABCD4-216ENST00000493752 COPRSQ9NQ92 184 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 MINPP1Q9UNW1 487 aa10.13□□□□□ -0.79
ABCD4-216ENST00000493752 PNMA6EA0A0J9YXQ4 647 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 HMMRO75330 724 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 CIAO1O76071 339 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 ANKRD2Q9GZV1 360 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
ABCD4-216ENST00000493752 RIPOR2Q9Y4F9 1068 aa10.12□□□□□ -0.79
ABCD4-216ENST00000493752 ANKRD31Q8N7Z5 1873 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 EYA2O00167 538 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 ARHGAP27Q6ZUM4 889 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 SIRT2Q8IXJ6 389 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 MPNDQ8N594 471 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 RTFDC1Q9BY42 306 aaPredicted RBP10.11□□□□□ -0.79
ABCD4-216ENST00000493752 PUS3Q9BZE2 481 aaKnown RBP10.11□□□□□ -0.79
ABCD4-216ENST00000493752 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
ABCD4-216ENST00000493752 NSFL1CQ9UNZ2 370 aaKnown RBP10.11□□□□□ -0.79
ABCD4-216ENST00000493752 TNRC6CQ9HCJ0 1690 aaKnown RBP10.11□□□□□ -0.79
ABCD4-216ENST00000493752 MROH5Q6ZUA9 1318 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms