RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDC42SE1-206ENST00000492796 GRAPQ13588 217 aa13.56□□□□□ -0.24
CDC42SE1-206ENST00000492796 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-206ENST00000492796 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
CDC42SE1-206ENST00000492796 PRELPP51888 382 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 GCKRQ14397 625 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 PSMD1Q99460 953 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 TAF1P21675 1872 aa13.55□□□□□ -0.24
CDC42SE1-206ENST00000492796 F6X3S4 739 aa13.54□□□□□ -0.24
CDC42SE1-206ENST00000492796 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
CDC42SE1-206ENST00000492796 BEND3Q5T5X7 828 aa13.54□□□□□ -0.24
CDC42SE1-206ENST00000492796 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
CDC42SE1-206ENST00000492796 H7C1W4 665 aa13.53□□□□□ -0.24
CDC42SE1-206ENST00000492796 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
CDC42SE1-206ENST00000492796 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
CDC42SE1-206ENST00000492796 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
CDC42SE1-206ENST00000492796 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
CDC42SE1-206ENST00000492796 ALDH1L1O75891 902 aa13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 CTSWP56202 376 aa13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 SRCIN1Q9C0H9 1055 aa13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
CDC42SE1-206ENST00000492796 LTBP1Q14766 1721 aa13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 COL4A1P02462 1669 aa13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 CASP7P55210 303 aa13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
CDC42SE1-206ENST00000492796 DUOX1Q9NRD9 1551 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 GRM8O00222 908 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 ZNF277Q9NRM2 450 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
CDC42SE1-206ENST00000492796 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 MPNDQ8N594 471 aa13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 TTLL11Q8NHH1 800 aa13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
CDC42SE1-206ENST00000492796 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
CDC42SE1-206ENST00000492796 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
CDC42SE1-206ENST00000492796 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
CDC42SE1-206ENST00000492796 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-206ENST00000492796 UTYO14607 1347 aa13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 CSF1RP07333 972 aa13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 GREM2Q9H772 168 aa13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 COL4A5P29400 1685 aa13.47□□□□□ -0.25
CDC42SE1-206ENST00000492796 FZD9O00144 591 aa13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 KIF3CO14782 793 aa13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 ARHGAP45Q92619 1136 aa13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.25
CDC42SE1-206ENST00000492796 SCN4AP35499 1836 aa13.46□□□□□ -0.26
CDC42SE1-206ENST00000492796 ITGA6P23229 1130 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 FOXO4P98177 505 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 PODXL2Q9NZ53 605 aa13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
CDC42SE1-206ENST00000492796 XDHP47989 1333 aa13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 GPSM2P81274 684 aa13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 AOC3Q16853 763 aa13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 EYA3Q99504 573 aa13.44□□□□□ -0.26
CDC42SE1-206ENST00000492796 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 VEGFAP15692 232 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 GPC2Q8N158 579 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 RRAGCQ9HB90 399 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
CDC42SE1-206ENST00000492796 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms