RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 CELF1Q92879 486 aaKnown RBP23.89■■□□□ 1.41
CHD1L-209ENST00000492728 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
CHD1L-209ENST00000492728 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
CHD1L-209ENST00000492728 SF3B3Q15393 1217 aaKnown RBP23.88■■□□□ 1.41
CHD1L-209ENST00000492728 DPP8Q6V1X1 898 aaPredicted RBP23.88■■□□□ 1.41
CHD1L-209ENST00000492728 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
CHD1L-209ENST00000492728 CCDC27Q2M243 656 aa23.87■■□□□ 1.41
CHD1L-209ENST00000492728 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
CHD1L-209ENST00000492728 MPNDQ8N594 471 aa23.87■■□□□ 1.41
CHD1L-209ENST00000492728 MYD88Q99836 296 aa23.87■■□□□ 1.41
CHD1L-209ENST00000492728 CREBZFQ9NS37 354 aa23.87■■□□□ 1.41
CHD1L-209ENST00000492728 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
CHD1L-209ENST00000492728 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
CHD1L-209ENST00000492728 EPS15P42566 896 aa23.86■■□□□ 1.41
CHD1L-209ENST00000492728 IFFO2Q5TF58 517 aa23.86■■□□□ 1.41
CHD1L-209ENST00000492728 MAP1SQ66K74 1059 aaPredicted RBP23.86■■□□□ 1.41
CHD1L-209ENST00000492728 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
CHD1L-209ENST00000492728 MRS2Q9HD23 443 aa23.85■■□□□ 1.41
CHD1L-209ENST00000492728 CLEC11AQ9Y240 323 aa23.85■■□□□ 1.41
CHD1L-209ENST00000492728 CXCL9Q07325 125 aa23.84■■□□□ 1.41
CHD1L-209ENST00000492728 ZBTB38Q8NAP3 1195 aaPredicted RBP23.84■■□□□ 1.41
CHD1L-209ENST00000492728 SUPT20HQ8NEM7 779 aa23.84■■□□□ 1.41
CHD1L-209ENST00000492728 JARID2Q92833 1246 aaPredicted RBP23.84■■□□□ 1.41
CHD1L-209ENST00000492728 TMX4Q9H1E5 349 aaPredicted RBP23.84■■□□□ 1.41
CHD1L-209ENST00000492728 VPS33BQ9H267 617 aa23.84■■□□□ 1.41
CHD1L-209ENST00000492728 MKRN1Q9UHC7 482 aaKnown RBP23.84■■□□□ 1.41
CHD1L-209ENST00000492728 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
CHD1L-209ENST00000492728 PNMA8AQ86V59 439 aaPredicted RBP23.83■■□□□ 1.41
CHD1L-209ENST00000492728 ZNRF3Q9ULT6 936 aa23.83■■□□□ 1.41
CHD1L-209ENST00000492728 YDJCA8MPS7 323 aa23.82■■□□□ 1.4
CHD1L-209ENST00000492728 LMOD1P29536 600 aaPredicted RBP23.81■■□□□ 1.4
CHD1L-209ENST00000492728 TMC4Q7Z404 712 aa23.81■■□□□ 1.4
CHD1L-209ENST00000492728 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
CHD1L-209ENST00000492728 METTL22Q9BUU2 404 aaPredicted RBP23.81■■□□□ 1.4
CHD1L-209ENST00000492728 SEC31BQ9NQW1 1179 aa23.81■■□□□ 1.4
CHD1L-209ENST00000492728 CNTNAP1P78357 1384 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
CHD1L-209ENST00000492728 IGKV5-2P06315 115 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 GPSM2P81274 684 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 FMR1Q06787 632 aaKnown RBP eCLIP23.8■■□□□ 1.4
CHD1L-209ENST00000492728 G2E3Q7L622 706 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 CCDC191Q8NCU4 936 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 MAP3K2Q9Y2U5 619 aa23.8■■□□□ 1.4
CHD1L-209ENST00000492728 ANP32CO43423 234 aa23.79■■□□□ 1.4
CHD1L-209ENST00000492728 RAD17O75943 681 aa23.79■■□□□ 1.4
CHD1L-209ENST00000492728 HSPA1AP0DMV8 641 aaKnown RBP23.79■■□□□ 1.4
CHD1L-209ENST00000492728 HSPA1BP0DMV9 641 aaKnown RBP23.79■■□□□ 1.4
CHD1L-209ENST00000492728 GMPSP49915 693 aaPredicted RBP23.79■■□□□ 1.4
CHD1L-209ENST00000492728 GPRC5DQ9NZD1 345 aa23.79■■□□□ 1.4
CHD1L-209ENST00000492728 POLLQ9UGP5 575 aa23.79■■□□□ 1.4
CHD1L-209ENST00000492728 IL16Q14005 1332 aa23.79■■□□□ 1.4
CHD1L-209ENST00000492728 TWISTNBQ3B726 338 aaPredicted RBP23.78■■□□□ 1.4
CHD1L-209ENST00000492728 GPR101Q96P66 508 aaPredicted RBP23.78■■□□□ 1.4
CHD1L-209ENST00000492728 CWC25Q9NXE8 425 aaPredicted RBP23.78■■□□□ 1.4
CHD1L-209ENST00000492728 NSFL1CQ9UNZ2 370 aaKnown RBP23.78■■□□□ 1.4
CHD1L-209ENST00000492728 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
CHD1L-209ENST00000492728 SHTN1A0MZ66 631 aa23.77■■□□□ 1.4
CHD1L-209ENST00000492728 PI4KAP2A4QPH2 592 aa23.77■■□□□ 1.4
CHD1L-209ENST00000492728 TMEM88BA6NKF7 163 aa23.77■■□□□ 1.4
CHD1L-209ENST00000492728 COL13A1Q5TAT6 717 aaPredicted RBP23.77■■□□□ 1.4
CHD1L-209ENST00000492728 CIAPIN1Q6FI81 312 aa23.77■■□□□ 1.4
CHD1L-209ENST00000492728 PI4KAP1Q8N8J0 262 aa23.77■■□□□ 1.4
CHD1L-209ENST00000492728 CCDC85AQ96PX6 553 aaPredicted RBP23.77■■□□□ 1.4
CHD1L-209ENST00000492728 SALL2Q9Y467 1007 aaPredicted RBP23.77■■□□□ 1.4
CHD1L-209ENST00000492728 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
CHD1L-209ENST00000492728 KSR2Q6VAB6 950 aa23.76■■□□□ 1.39
CHD1L-209ENST00000492728 RPS8P62241 208 aaKnown RBP23.75■■□□□ 1.39
CHD1L-209ENST00000492728 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
CHD1L-209ENST00000492728 USP50Q70EL3 339 aaPredicted RBP23.75■■□□□ 1.39
CHD1L-209ENST00000492728 DBNDD1Q9H9R9 158 aa23.75■■□□□ 1.39
CHD1L-209ENST00000492728 RIMBP2O15034 1052 aa23.74■■□□□ 1.39
CHD1L-209ENST00000492728 CWF19L2Q2TBE0 894 aaKnown RBP23.74■■□□□ 1.39
CHD1L-209ENST00000492728 SPINK5Q9NQ38 1064 aaPredicted RBP23.74■■□□□ 1.39
CHD1L-209ENST00000492728 ADARB2Q9NS39 739 aaKnown RBP23.74■■□□□ 1.39
CHD1L-209ENST00000492728 TRAF5O00463 557 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 PDE8AO60658 829 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 TBC1D16Q8TBP0 767 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 TRPM4Q8TD43 1214 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 CDHR2Q9BYE9 1310 aa23.73■■□□□ 1.39
CHD1L-209ENST00000492728 C6orf229H3BNL8 230 aa23.72■■□□□ 1.39
CHD1L-209ENST00000492728 SLC4A2P04920 1241 aa23.72■■□□□ 1.39
CHD1L-209ENST00000492728 VEGFBP49765 207 aa23.72■■□□□ 1.39
CHD1L-209ENST00000492728 HIRAP54198 1017 aaPredicted RBP23.72■■□□□ 1.39
CHD1L-209ENST00000492728 KCNQ5Q9NR82 932 aa23.72■■□□□ 1.39
CHD1L-209ENST00000492728 ZBTB12Q9Y330 459 aaPredicted RBP23.72■■□□□ 1.39
CHD1L-209ENST00000492728 RTL9Q8NET4 1388 aa23.72■■□□□ 1.39
CHD1L-209ENST00000492728 NEURL1BA8MQ27 555 aa23.71■■□□□ 1.39
CHD1L-209ENST00000492728 DOK7Q18PE1 504 aa23.71■■□□□ 1.39
CHD1L-209ENST00000492728 CCDC152Q4G0S7 254 aa23.71■■□□□ 1.39
CHD1L-209ENST00000492728 CHMP4AQ9BY43 222 aa23.71■■□□□ 1.39
CHD1L-209ENST00000492728 PSMD14O00487 310 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 ECE2O60344 883 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 CTSWP56202 376 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 TNIP1Q15025 636 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 PODXL2Q9NZ53 605 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 SCN9AQ15858 1988 aa23.7■■□□□ 1.38
CHD1L-209ENST00000492728 RASSF10A6NK89 507 aa23.69■■□□□ 1.38
CHD1L-209ENST00000492728 FLIIQ13045 1269 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms