RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 TAF1P21675 1872 aa29.86■■■□□ 2.37
NUP188-209ENST00000491990 LMOD1P29536 600 aaPredicted RBP29.85■■■□□ 2.37
NUP188-209ENST00000491990 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
NUP188-209ENST00000491990 CCDC30Q5VVM6 783 aa29.85■■■□□ 2.37
NUP188-209ENST00000491990 ADAMTSL1Q8N6G6 1762 aa29.85■■■□□ 2.37
NUP188-209ENST00000491990 SF3B3Q15393 1217 aaKnown RBP29.84■■■□□ 2.37
NUP188-209ENST00000491990 IFFO2Q5TF58 517 aa29.84■■■□□ 2.37
NUP188-209ENST00000491990 PASKQ96RG2 1323 aa29.84■■■□□ 2.37
NUP188-209ENST00000491990 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
NUP188-209ENST00000491990 PCNTO95613 3336 aa29.82■■■□□ 2.36
NUP188-209ENST00000491990 IRS4O14654 1257 aaPredicted RBP29.82■■■□□ 2.36
NUP188-209ENST00000491990 ANP32CO43423 234 aa29.82■■■□□ 2.36
NUP188-209ENST00000491990 RTL5Q5HYW3 569 aaPredicted RBP29.82■■■□□ 2.36
NUP188-209ENST00000491990 DDX58O95786 925 aaKnown RBP29.81■■■□□ 2.36
NUP188-209ENST00000491990 HSP90B1P14625 803 aaKnown RBP29.81■■■□□ 2.36
NUP188-209ENST00000491990 MRS2Q9HD23 443 aa29.81■■■□□ 2.36
NUP188-209ENST00000491990 ZNRF3Q9ULT6 936 aa29.81■■■□□ 2.36
NUP188-209ENST00000491990 LRRC37AA6NMS7 1700 aa29.8■■■□□ 2.36
NUP188-209ENST00000491990 ITGBL1O95965 494 aaPredicted RBP29.8■■■□□ 2.36
NUP188-209ENST00000491990 SCNN1DP51172 638 aa29.8■■■□□ 2.36
NUP188-209ENST00000491990 KIAA2012Q0VF49 1180 aa29.8■■■□□ 2.36
NUP188-209ENST00000491990 WWC1Q8IX03 1113 aa29.8■■■□□ 2.36
NUP188-209ENST00000491990 ZBTB38Q8NAP3 1195 aaPredicted RBP29.8■■■□□ 2.36
NUP188-209ENST00000491990 MYD88Q99836 296 aa29.8■■■□□ 2.36
NUP188-209ENST00000491990 TSPYL6Q8N831 410 aa29.79■■■□□ 2.36
NUP188-209ENST00000491990 CCDC191Q8NCU4 936 aa29.79■■■□□ 2.36
NUP188-209ENST00000491990 TSR2Q969E8 191 aaKnown RBP29.79■■■□□ 2.36
NUP188-209ENST00000491990 LTBP1Q14766 1721 aa29.79■■■□□ 2.36
NUP188-209ENST00000491990 NCBP3Q53F19 620 aaKnown RBP29.78■■■□□ 2.36
NUP188-209ENST00000491990 EPS15P42566 896 aa29.77■■■□□ 2.36
NUP188-209ENST00000491990 MAP1SQ66K74 1059 aaPredicted RBP29.77■■■□□ 2.36
NUP188-209ENST00000491990 CNTROBQ8N137 903 aa29.77■■■□□ 2.36
NUP188-209ENST00000491990 CELF1Q92879 486 aaKnown RBP29.77■■■□□ 2.36
NUP188-209ENST00000491990 IL16Q14005 1332 aa29.76■■■□□ 2.36
NUP188-209ENST00000491990 CXCL9Q07325 125 aa29.76■■■□□ 2.35
NUP188-209ENST00000491990 METTL22Q9BUU2 404 aaPredicted RBP29.76■■■□□ 2.35
NUP188-209ENST00000491990 TMEM88BA6NKF7 163 aa29.75■■■□□ 2.35
NUP188-209ENST00000491990 USP50Q70EL3 339 aaPredicted RBP29.75■■■□□ 2.35
NUP188-209ENST00000491990 STK31Q9BXU1 1019 aa29.75■■■□□ 2.35
NUP188-209ENST00000491990 CWC25Q9NXE8 425 aaPredicted RBP29.75■■■□□ 2.35
NUP188-209ENST00000491990 MKRN1Q9UHC7 482 aaKnown RBP29.75■■■□□ 2.35
NUP188-209ENST00000491990 DUOX1Q9NRD9 1551 aa29.74■■■□□ 2.35
NUP188-209ENST00000491990 PCCAP05165 728 aaPredicted RBP29.74■■■□□ 2.35
NUP188-209ENST00000491990 NSFL1CQ9UNZ2 370 aaKnown RBP29.74■■■□□ 2.35
NUP188-209ENST00000491990 CIAPIN1Q6FI81 312 aa29.73■■■□□ 2.35
NUP188-209ENST00000491990 GPRC5DQ9NZD1 345 aa29.73■■■□□ 2.35
NUP188-209ENST00000491990 RPS8P62241 208 aaKnown RBP29.72■■■□□ 2.35
NUP188-209ENST00000491990 TNIP1Q15025 636 aa29.72■■■□□ 2.35
NUP188-209ENST00000491990 TWISTNBQ3B726 338 aaPredicted RBP29.72■■■□□ 2.35
NUP188-209ENST00000491990 MAP3K2Q9Y2U5 619 aa29.72■■■□□ 2.35
NUP188-209ENST00000491990 KSR2Q6VAB6 950 aa29.71■■■□□ 2.35
NUP188-209ENST00000491990 ADARB2Q9NS39 739 aaKnown RBP29.71■■■□□ 2.35
NUP188-209ENST00000491990 CNTNAP1P78357 1384 aa29.71■■■□□ 2.35
NUP188-209ENST00000491990 CDHR2Q9BYE9 1310 aa29.71■■■□□ 2.35
NUP188-209ENST00000491990 PDE8AO60658 829 aa29.7■■■□□ 2.35
NUP188-209ENST00000491990 WASHC4Q2M389 1173 aa29.7■■■□□ 2.35
NUP188-209ENST00000491990 CCDC152Q4G0S7 254 aa29.7■■■□□ 2.35
NUP188-209ENST00000491990 COL4A1P02462 1669 aa29.69■■■□□ 2.34
NUP188-209ENST00000491990 PI4KAP2A4QPH2 592 aa29.69■■■□□ 2.34
NUP188-209ENST00000491990 C6orf229H3BNL8 230 aa29.69■■■□□ 2.34
NUP188-209ENST00000491990 RAD17O75943 681 aa29.69■■■□□ 2.34
NUP188-209ENST00000491990 HSPA1AP0DMV8 641 aaKnown RBP29.69■■■□□ 2.34
NUP188-209ENST00000491990 HSPA1BP0DMV9 641 aaKnown RBP29.69■■■□□ 2.34
NUP188-209ENST00000491990 GMPSP49915 693 aaPredicted RBP29.69■■■□□ 2.34
NUP188-209ENST00000491990 PI4KAP1Q8N8J0 262 aa29.69■■■□□ 2.34
NUP188-209ENST00000491990 GPSM2P81274 684 aa29.68■■■□□ 2.34
NUP188-209ENST00000491990 NEXNQ0ZGT2 675 aa29.68■■■□□ 2.34
NUP188-209ENST00000491990 BCL2L13Q9BXK5 485 aa29.68■■■□□ 2.34
NUP188-209ENST00000491990 EYA3Q99504 573 aa29.67■■■□□ 2.34
NUP188-209ENST00000491990 SEC31BQ9NQW1 1179 aa29.67■■■□□ 2.34
NUP188-209ENST00000491990 YDJCA8MPS7 323 aa29.66■■■□□ 2.34
NUP188-209ENST00000491990 JARID2Q92833 1246 aaPredicted RBP29.66■■■□□ 2.34
NUP188-209ENST00000491990 POLLQ9UGP5 575 aa29.66■■■□□ 2.34
NUP188-209ENST00000491990 SLC4A2P04920 1241 aa29.65■■■□□ 2.34
NUP188-209ENST00000491990 WDR63Q8IWG1 891 aa29.65■■■□□ 2.34
NUP188-209ENST00000491990 RIMBP2O15034 1052 aa29.64■■■□□ 2.34
NUP188-209ENST00000491990 IGKV5-2P06315 115 aa29.64■■■□□ 2.34
NUP188-209ENST00000491990 FANCIQ9NVI1 1328 aa29.64■■■□□ 2.34
NUP188-209ENST00000491990 CACNA1FO60840 1977 aa29.63■■■□□ 2.33
NUP188-209ENST00000491990 TBC1D16Q8TBP0 767 aa29.63■■■□□ 2.33
NUP188-209ENST00000491990 DBNDD1Q9H9R9 158 aa29.63■■■□□ 2.33
NUP188-209ENST00000491990 PODXL2Q9NZ53 605 aa29.63■■■□□ 2.33
NUP188-209ENST00000491990 SALL2Q9Y467 1007 aaPredicted RBP29.63■■■□□ 2.33
NUP188-209ENST00000491990 COL13A1Q5TAT6 717 aaPredicted RBP29.62■■■□□ 2.33
NUP188-209ENST00000491990 G2E3Q7L622 706 aa29.62■■■□□ 2.33
NUP188-209ENST00000491990 CCDC85AQ96PX6 553 aaPredicted RBP29.62■■■□□ 2.33
NUP188-209ENST00000491990 RASSF10A6NK89 507 aa29.61■■■□□ 2.33
NUP188-209ENST00000491990 VEGFBP49765 207 aa29.61■■■□□ 2.33
NUP188-209ENST00000491990 ANKIB1Q9P2G1 1089 aa29.61■■■□□ 2.33
NUP188-209ENST00000491990 TRPM7Q96QT4 1865 aa29.61■■■□□ 2.33
NUP188-209ENST00000491990 MYH3P11055 1940 aa29.61■■■□□ 2.33
NUP188-209ENST00000491990 DEFB115Q30KQ5 88 aa29.6■■■□□ 2.33
NUP188-209ENST00000491990 ANKRD18AQ8IVF6 992 aa29.6■■■□□ 2.33
NUP188-209ENST00000491990 ZC3H12CQ9C0D7 883 aaKnown RBP29.6■■■□□ 2.33
NUP188-209ENST00000491990 CNOT7Q9UIV1 285 aaKnown RBP29.6■■■□□ 2.33
NUP188-209ENST00000491990 ABT1Q9ULW3 272 aaKnown RBP29.6■■■□□ 2.33
NUP188-209ENST00000491990 NEURL1BA8MQ27 555 aa29.59■■■□□ 2.33
NUP188-209ENST00000491990 H7C1D1 291 aa29.59■■■□□ 2.33
NUP188-209ENST00000491990 ECE2O60344 883 aa29.59■■■□□ 2.33
NUP188-209ENST00000491990 CTSWP56202 376 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms