RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KSR2Q6VAB6 950 aa21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 FAM9BQ8IZU0 186 aa21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 MYH16Q9H6N6 1097 aa21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-217ENST00000491330 TNIP1Q15025 636 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 EYA3Q99504 573 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 ZNRF3Q9ULT6 936 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 ZNF541Q9H0D2 1346 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 WDR90Q96KV7 1748 aa21.21■□□□□ 0.99
PDLIM2-217ENST00000491330 G3V3G9 751 aa21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 PCCAP05165 728 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 DCAF8Q5TAQ9 597 aa21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 KLRG1Q96E93 195 aa21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 RTFDC1Q9BY42 306 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 NSFL1CQ9UNZ2 370 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
PDLIM2-217ENST00000491330 PDE8AO60658 829 aa21.19■□□□□ 0.98
PDLIM2-217ENST00000491330 AOC3Q16853 763 aa21.19■□□□□ 0.98
PDLIM2-217ENST00000491330 CACNA1SQ13698 1873 aa21.18■□□□□ 0.98
PDLIM2-217ENST00000491330 RPS8P62241 208 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-217ENST00000491330 TSPYL6Q8N831 410 aa21.18■□□□□ 0.98
PDLIM2-217ENST00000491330 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
PDLIM2-217ENST00000491330 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 C6orf229H3BNL8 230 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 KIAA2012Q0VF49 1180 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 WASHC4Q2M389 1173 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 CCDC88AQ3V6T2 1871 aa21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 DICER1Q9UPY3 1922 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-217ENST00000491330 DNAJC5GQ8N7S2 189 aa21.16■□□□□ 0.98
PDLIM2-217ENST00000491330 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
PDLIM2-217ENST00000491330 CIAPIN1Q6FI81 312 aa21.15■□□□□ 0.98
PDLIM2-217ENST00000491330 ZC3H12CQ9C0D7 883 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-217ENST00000491330 CREBZFQ9NS37 354 aa21.15■□□□□ 0.98
PDLIM2-217ENST00000491330 ANKIB1Q9P2G1 1089 aa21.15■□□□□ 0.98
PDLIM2-217ENST00000491330 FKBP5Q13451 457 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-217ENST00000491330 USP50Q70EL3 339 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-217ENST00000491330 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.97
PDLIM2-217ENST00000491330 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-217ENST00000491330 FANCIQ9NVI1 1328 aa21.13■□□□□ 0.97
PDLIM2-217ENST00000491330 CELF1Q92879 486 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-217ENST00000491330 ANKRD36CQ5JPF3 1778 aa21.13■□□□□ 0.97
PDLIM2-217ENST00000491330 CDHR2Q9BYE9 1310 aa21.12■□□□□ 0.97
PDLIM2-217ENST00000491330 HTRA3P83110 453 aa21.12■□□□□ 0.97
PDLIM2-217ENST00000491330 FLIIQ13045 1269 aa21.12■□□□□ 0.97
PDLIM2-217ENST00000491330 ADARB2Q9NS39 739 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-217ENST00000491330 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
PDLIM2-217ENST00000491330 H7C1D1 291 aa21.11■□□□□ 0.97
PDLIM2-217ENST00000491330 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
PDLIM2-217ENST00000491330 CACNA1FO60840 1977 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 TMEM88BA6NKF7 163 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 CXCL9Q07325 125 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 GGA1Q9UJY5 639 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 SCN4AP35499 1836 aa21.1■□□□□ 0.97
PDLIM2-217ENST00000491330 JMYQ8N9B5 988 aa21.09■□□□□ 0.97
PDLIM2-217ENST00000491330 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
PDLIM2-217ENST00000491330 RIMBP2O15034 1052 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 VAMP4O75379 141 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 RAD17O75943 681 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 EPS15P42566 896 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 CTSWP56202 376 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 GPSM2P81274 684 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 LINS1Q8NG48 757 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 GPRC5DQ9NZD1 345 aa21.08■□□□□ 0.97
PDLIM2-217ENST00000491330 NEURL1BA8MQ27 555 aa21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 SCNN1DP51172 638 aa21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 MAP1SQ66K74 1059 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 PODXL2Q9NZ53 605 aa21.07■□□□□ 0.96
PDLIM2-217ENST00000491330 UFL1O94874 794 aa21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 IGKV5-2P06315 115 aa21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 GMPSP49915 693 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 UBE3BQ7Z3V4 1068 aa21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 TBC1D16Q8TBP0 767 aa21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 JARID2Q92833 1246 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
PDLIM2-217ENST00000491330 XDHP47989 1333 aa21.05■□□□□ 0.96
PDLIM2-217ENST00000491330 ATP2B4P23634 1241 aa21.05■□□□□ 0.96
PDLIM2-217ENST00000491330 RPS12P25398 132 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-217ENST00000491330 ABT1Q9ULW3 272 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-217ENST00000491330 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 H7C1W4 665 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 GCKRQ14397 625 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 G2E3Q7L622 706 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 ZC3H15Q8WU90 426 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 DPF2Q92785 391 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 DBNDD1Q9H9R9 158 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 POLLQ9UGP5 575 aa21.04■□□□□ 0.96
PDLIM2-217ENST00000491330 CNOT7Q9UIV1 285 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms