RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 NCAPGQ9BPX3 1015 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 KCNF1Q9H3M0 494 aa11.98□□□□□ -0.49
BRD9-209ENST00000490814 HOXC9P31274 260 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
BRD9-209ENST00000490814 ARHGEF10O15013 1369 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 NPHP1O15259 732 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 AP5Z1O43299 807 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 TNNT1P13805 278 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 CEBPZQ03701 1054 aaKnown RBP11.97□□□□□ -0.49
BRD9-209ENST00000490814 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
BRD9-209ENST00000490814 CT47A1Q5JQC4 288 aaPredicted RBP11.97□□□□□ -0.49
BRD9-209ENST00000490814 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 CEP83Q9Y592 693 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 SBNO1A3KN83 1393 aa11.97□□□□□ -0.49
BRD9-209ENST00000490814 TPM3P06753 285 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 CCDC192P0DO97 292 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 LRMPQ12912 555 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
BRD9-209ENST00000490814 HSP90AB4PQ58FF6 505 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 BOLA2Q9H3K6 86 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 ZNF142P52746 1687 aaPredicted RBP11.96□□□□□ -0.49
BRD9-209ENST00000490814 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
BRD9-209ENST00000490814 DLC1Q96QB1 1528 aa11.96□□□□□ -0.49
BRD9-209ENST00000490814 PPFIA3O75145 1194 aa11.96□□□□□ -0.5
BRD9-209ENST00000490814 CCDC112Q8NEF3 446 aa11.96□□□□□ -0.5
BRD9-209ENST00000490814 BICD2Q8TD16 824 aa11.96□□□□□ -0.5
BRD9-209ENST00000490814 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.96□□□□□ -0.5
BRD9-209ENST00000490814 V9GYY5 206 aaPredicted RBP11.96□□□□□ -0.5
BRD9-209ENST00000490814 MST1RQ04912 1400 aa11.96□□□□□ -0.5
BRD9-209ENST00000490814 MAP3K5Q99683 1374 aa11.96□□□□□ -0.5
BRD9-209ENST00000490814 RPAP1Q9BWH6 1393 aaPredicted RBP11.96□□□□□ -0.5
BRD9-209ENST00000490814 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 CTR9Q6PD62 1173 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 GPATCH11Q8N954 259 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 FAM227BQ96M60 508 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 RASSF4Q9H2L5 321 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
BRD9-209ENST00000490814 NOP2P46087 812 aaKnown RBP11.95□□□□□ -0.5
BRD9-209ENST00000490814 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.5
BRD9-209ENST00000490814 LUZP1Q86V48 1076 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 TCHHQ07283 1943 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
BRD9-209ENST00000490814 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
BRD9-209ENST00000490814 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
BRD9-209ENST00000490814 RBM8AQ9Y5S9 174 aaKnown RBP11.95□□□□□ -0.5
BRD9-209ENST00000490814 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 KRT85P78386 507 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 ME3Q16798 604 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 TICAM2Q86XR7 235 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 SPATA31A3Q5VYP0 1347 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 CCDC172P0C7W6 258 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 NCBP1Q09161 790 aaKnown RBP11.94□□□□□ -0.5
BRD9-209ENST00000490814 ICE2Q659A1 982 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 KRT222Q8N1A0 295 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
BRD9-209ENST00000490814 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 MTMR6Q9Y217 621 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 TECPR2O15040 1411 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 CEP120Q8N960 986 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 DDX11Q96FC9 970 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 TTC14Q96N46 770 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
BRD9-209ENST00000490814 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
BRD9-209ENST00000490814 TNMDQ9H2S6 317 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
BRD9-209ENST00000490814 DIP2AQ14689 1571 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
BRD9-209ENST00000490814 BLOC1S2Q6QNY1 142 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 CDC37L1Q7L3B6 337 aa11.93□□□□□ -0.5
BRD9-209ENST00000490814 MORC2Q9Y6X9 1032 aaPredicted RBP11.93□□□□□ -0.5
BRD9-209ENST00000490814 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
BRD9-209ENST00000490814 MAP3K11Q16584 847 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 AOX1Q06278 1338 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 H3BQV1 296 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 LIG1P18858 919 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 EDC3Q96F86 508 aaKnown RBP11.92□□□□□ -0.5
BRD9-209ENST00000490814 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
BRD9-209ENST00000490814 MYL6BP14649 208 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms