RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-210ENST00000490808 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
HDAC3-210ENST00000490808 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
HDAC3-210ENST00000490808 TTLL7Q6ZT98 887 aa12.61□□□□□ -0.39
HDAC3-210ENST00000490808 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
HDAC3-210ENST00000490808 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
HDAC3-210ENST00000490808 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
HDAC3-210ENST00000490808 PNMA6EA0A0J9YXQ4 647 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 SERPINB2P05120 415 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-210ENST00000490808 ST5P78524 1137 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
HDAC3-210ENST00000490808 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 AOX1Q06278 1338 aa12.6□□□□□ -0.39
HDAC3-210ENST00000490808 APBB1O00213 710 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 NPHP1O15259 732 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 CDC45O75419 566 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 PDE6BP35913 854 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC3-210ENST00000490808 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 SMIM5Q71RC9 77 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-210ENST00000490808 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 BRIP1Q9BX63 1249 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-210ENST00000490808 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
HDAC3-210ENST00000490808 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
HDAC3-210ENST00000490808 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
HDAC3-210ENST00000490808 DDR1Q08345 913 aa12.58□□□□□ -0.4
HDAC3-210ENST00000490808 HLFQ16534 295 aa12.58□□□□□ -0.4
HDAC3-210ENST00000490808 CLASRPQ8N2M8 674 aaKnown RBP12.58□□□□□ -0.4
HDAC3-210ENST00000490808 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
HDAC3-210ENST00000490808 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-210ENST00000490808 APLP1P51693 650 aa12.57□□□□□ -0.4
HDAC3-210ENST00000490808 BECN1Q14457 450 aa12.57□□□□□ -0.4
HDAC3-210ENST00000490808 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
HDAC3-210ENST00000490808 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
HDAC3-210ENST00000490808 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
HDAC3-210ENST00000490808 KIF3CO14782 793 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 ERC2O15083 957 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 MX1P20591 662 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 SUCLG2Q96I99 432 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
HDAC3-210ENST00000490808 MYH3P11055 1940 aa12.56□□□□□ -0.4
HDAC3-210ENST00000490808 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-210ENST00000490808 H7C1W4 665 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 SMARCA5O60264 1052 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-210ENST00000490808 CAPN15O75808 1086 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 PDE1AP54750 535 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
HDAC3-210ENST00000490808 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 LAMB2P55268 1798 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
HDAC3-210ENST00000490808 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
HDAC3-210ENST00000490808 H0YIN7 160 aa12.54□□□□□ -0.4
HDAC3-210ENST00000490808 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
HDAC3-210ENST00000490808 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
HDAC3-210ENST00000490808 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
HDAC3-210ENST00000490808 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
HDAC3-210ENST00000490808 REC8O95072 547 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 NTSR2O95665 410 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
HDAC3-210ENST00000490808 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-210ENST00000490808 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-210ENST00000490808 DNAJC5GQ8N7S2 189 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-210ENST00000490808 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 C22orf23Q9BZE7 217 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
HDAC3-210ENST00000490808 KIAA1551Q9HCM1 1747 aa12.53□□□□□ -0.4
HDAC3-210ENST00000490808 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.41
HDAC3-210ENST00000490808 GPTP24298 496 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 NLRP3Q96P20 1036 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 PIM2Q9P1W9 311 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
HDAC3-210ENST00000490808 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
HDAC3-210ENST00000490808 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
HDAC3-210ENST00000490808 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
HDAC3-210ENST00000490808 TOMM70O94826 608 aa12.51□□□□□ -0.41
HDAC3-210ENST00000490808 NPR1P16066 1061 aa12.51□□□□□ -0.41
HDAC3-210ENST00000490808 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms