RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 COG6Q9Y2V7 657 aa24.86■■□□□ 1.57
SHROOM3-209ENST00000490690 ZBTB7BO15156 539 aaPredicted RBP24.85■■□□□ 1.57
SHROOM3-209ENST00000490690 CSF1RP07333 972 aa24.85■■□□□ 1.57
SHROOM3-209ENST00000490690 DPEP1P16444 411 aa24.85■■□□□ 1.57
SHROOM3-209ENST00000490690 TTLL6Q8N841 843 aa24.85■■□□□ 1.57
SHROOM3-209ENST00000490690 ZNF622Q969S3 477 aaKnown RBP eCLIP24.85■■□□□ 1.57
SHROOM3-209ENST00000490690 RABL6Q3YEC7 729 aaPredicted RBP24.84■■□□□ 1.57
SHROOM3-209ENST00000490690 TTLL11Q8NHH1 800 aa24.84■■□□□ 1.57
SHROOM3-209ENST00000490690 JARID2Q92833 1246 aaPredicted RBP24.84■■□□□ 1.57
SHROOM3-209ENST00000490690 SUCLG2Q96I99 432 aa24.84■■□□□ 1.57
SHROOM3-209ENST00000490690 A0A0G2JLW4 131 aa24.83■■□□□ 1.57
SHROOM3-209ENST00000490690 DCAF8L1A6NGE4 600 aa24.83■■□□□ 1.57
SHROOM3-209ENST00000490690 BBOX1O75936 387 aa24.83■■□□□ 1.57
SHROOM3-209ENST00000490690 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
SHROOM3-209ENST00000490690 SOGA3Q5TF21 947 aa24.83■■□□□ 1.57
SHROOM3-209ENST00000490690 CHRNA5P30532 468 aa24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 IFIT5Q13325 482 aaKnown RBP24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 GRAPQ13588 217 aa24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 CCDC57Q2TAC2 916 aa24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 GRIPAP1Q4V328 841 aa24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 GRAPLQ8TC17 118 aaPredicted RBP24.82■■□□□ 1.56
SHROOM3-209ENST00000490690 ANKRD18BA2A2Z9 1011 aa24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 FOXO4P98177 505 aa24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 LMBR1LQ6UX01 489 aa24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 BICC1Q9H694 974 aaKnown RBP24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 CHMP3Q9Y3E7 222 aa24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 LRRFIP2Q9Y608 721 aaKnown RBP24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 ANKRD31Q8N7Z5 1873 aa24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 DDX60Q8IY21 1712 aaKnown RBP24.81■■□□□ 1.56
SHROOM3-209ENST00000490690 CC2D2BQ6DHV5 1058 aa24.8■■□□□ 1.56
SHROOM3-209ENST00000490690 NLGN2Q8NFZ4 835 aa24.8■■□□□ 1.56
SHROOM3-209ENST00000490690 IGHMBP2P38935 993 aaKnown RBP24.79■■□□□ 1.56
SHROOM3-209ENST00000490690 C20orf194Q5TEA3 1177 aa24.79■■□□□ 1.56
SHROOM3-209ENST00000490690 TNRC6CQ9HCJ0 1690 aaKnown RBP24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 KCNA3P22001 575 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 ITGA6P23229 1130 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 MTX1Q13505 466 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 TAF7LQ5H9L4 462 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 C3orf67Q6ZVT6 689 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 ANKRD18AQ8IVF6 992 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 ZBTB40Q9NUA8 1239 aa24.78■■□□□ 1.56
SHROOM3-209ENST00000490690 RPS8P62241 208 aaKnown RBP24.77■■□□□ 1.56
SHROOM3-209ENST00000490690 KAZALD1Q96I82 304 aa24.77■■□□□ 1.56
SHROOM3-209ENST00000490690 GREM2Q9H772 168 aa24.77■■□□□ 1.56
SHROOM3-209ENST00000490690 DLEC1Q9Y238 1755 aa24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 PRPF40BQ6NWY9 871 aaKnown RBP24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 RPAP2Q8IXW5 612 aaPredicted RBP24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 ANKRD44Q8N8A2 993 aa24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 MYH3P11055 1940 aa24.76■■□□□ 1.55
SHROOM3-209ENST00000490690 PPEF1O14829 653 aaPredicted RBP24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 HMMRO75330 724 aa24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 EPHA10Q5JZY3 1008 aa24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 MPHOSPH8Q99549 860 aa24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 FBXO3Q9UK99 471 aa24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 BCS1LQ9Y276 419 aa24.75■■□□□ 1.55
SHROOM3-209ENST00000490690 COL11A2P13942 1736 aaPredicted RBP24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 KIAA1551Q9HCM1 1747 aa24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 GRIN3BO60391 1043 aa24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 NEFLP07196 543 aa24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 CCDC85AQ96PX6 553 aaPredicted RBP24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 BSDC1Q9NW68 430 aaPredicted RBP24.73■■□□□ 1.55
SHROOM3-209ENST00000490690 SRGAP3O43295 1099 aa24.72■■□□□ 1.55
SHROOM3-209ENST00000490690 SP8Q8IXZ3 490 aa24.72■■□□□ 1.55
SHROOM3-209ENST00000490690 CRBNQ96SW2 442 aa24.72■■□□□ 1.55
SHROOM3-209ENST00000490690 ATP6V0A2Q9Y487 856 aa24.72■■□□□ 1.55
SHROOM3-209ENST00000490690 ATP8B2P98198 1209 aa24.71■■□□□ 1.55
SHROOM3-209ENST00000490690 CCDC93Q567U6 631 aa24.71■■□□□ 1.55
SHROOM3-209ENST00000490690 RTKN2Q8IZC4 609 aa24.71■■□□□ 1.55
SHROOM3-209ENST00000490690 SEC31BQ9NQW1 1179 aa24.71■■□□□ 1.55
SHROOM3-209ENST00000490690 GPR162Q16538 588 aa24.7■■□□□ 1.54
SHROOM3-209ENST00000490690 CELF1Q92879 486 aaKnown RBP24.7■■□□□ 1.54
SHROOM3-209ENST00000490690 LDHAL6AQ6ZMR3 332 aa24.69■■□□□ 1.54
SHROOM3-209ENST00000490690 CEP85Q6P2H3 762 aa24.68■■□□□ 1.54
SHROOM3-209ENST00000490690 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
SHROOM3-209ENST00000490690 ANKRD2Q9GZV1 360 aa24.68■■□□□ 1.54
SHROOM3-209ENST00000490690 CNNM1Q9NRU3 951 aa24.68■■□□□ 1.54
SHROOM3-209ENST00000490690 SRCAPQ6ZRS2 3230 aa24.67■■□□□ 1.54
SHROOM3-209ENST00000490690 SUPT20HQ8NEM7 779 aa24.67■■□□□ 1.54
SHROOM3-209ENST00000490690 SSH3Q8TE77 659 aa24.67■■□□□ 1.54
SHROOM3-209ENST00000490690 C1orf115Q9H7X2 142 aa24.67■■□□□ 1.54
SHROOM3-209ENST00000490690 COPRSQ9NQ92 184 aa24.67■■□□□ 1.54
SHROOM3-209ENST00000490690 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
SHROOM3-209ENST00000490690 C21orf2O43822 256 aa24.66■■□□□ 1.54
SHROOM3-209ENST00000490690 CIAO1O76071 339 aa24.66■■□□□ 1.54
SHROOM3-209ENST00000490690 HSP90AB4PQ58FF6 505 aa24.66■■□□□ 1.54
SHROOM3-209ENST00000490690 C7orf43Q8WVR3 580 aa24.66■■□□□ 1.54
SHROOM3-209ENST00000490690 MROH5Q6ZUA9 1318 aa24.65■■□□□ 1.54
SHROOM3-209ENST00000490690 RFX5P48382 616 aaPredicted RBP24.64■■□□□ 1.54
SHROOM3-209ENST00000490690 PTPN12Q05209 780 aaKnown RBP24.64■■□□□ 1.54
SHROOM3-209ENST00000490690 POLA2Q14181 598 aa24.64■■□□□ 1.54
SHROOM3-209ENST00000490690 XDHP47989 1333 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 EYA2O00167 538 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 IL15P40933 162 aaPredicted RBP24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 DPP8Q6V1X1 898 aaPredicted RBP24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 MPNDQ8N594 471 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 PSMD1Q99460 953 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 VPS33BQ9H267 617 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 PODXL2Q9NZ53 605 aa24.63■■□□□ 1.53
SHROOM3-209ENST00000490690 LTBP3Q9NS15 1303 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms