RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 YDJCA8MPS7 323 aa20.36■□□□□ 0.85
COL2A1-207ENST00000490609 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
COL2A1-207ENST00000490609 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
COL2A1-207ENST00000490609 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
COL2A1-207ENST00000490609 SH3TC1Q8TE82 1336 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 SHTN1A0MZ66 631 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 LMOD1P29536 600 aaPredicted RBP20.35■□□□□ 0.85
COL2A1-207ENST00000490609 KIAA2012Q0VF49 1180 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 GRAPQ13588 217 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 MPNDQ8N594 471 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 GRAPLQ8TC17 118 aaPredicted RBP20.35■□□□□ 0.85
COL2A1-207ENST00000490609 PGAP2Q9UHJ9 254 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
COL2A1-207ENST00000490609 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
COL2A1-207ENST00000490609 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
COL2A1-207ENST00000490609 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
COL2A1-207ENST00000490609 PLBD2Q8NHP8 589 aa20.34■□□□□ 0.85
COL2A1-207ENST00000490609 HDGFL1Q5TGJ6 251 aa20.33■□□□□ 0.85
COL2A1-207ENST00000490609 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
COL2A1-207ENST00000490609 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
COL2A1-207ENST00000490609 FAM89AQ96GI7 184 aa20.33■□□□□ 0.85
COL2A1-207ENST00000490609 ADARB2Q9NS39 739 aaKnown RBP20.33■□□□□ 0.85
COL2A1-207ENST00000490609 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 RAD17O75943 681 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 HOXB7P09629 217 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 HSPA8P11142 646 aaKnown RBP20.32■□□□□ 0.84
COL2A1-207ENST00000490609 CTCFP49711 727 aaPredicted RBP20.32■□□□□ 0.84
COL2A1-207ENST00000490609 LBX1P52954 281 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 SF3B3Q15393 1217 aaKnown RBP20.32■□□□□ 0.84
COL2A1-207ENST00000490609 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
COL2A1-207ENST00000490609 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
COL2A1-207ENST00000490609 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
COL2A1-207ENST00000490609 SUPT20HQ8NEM7 779 aa20.31■□□□□ 0.84
COL2A1-207ENST00000490609 ABT1Q9ULW3 272 aaKnown RBP20.31■□□□□ 0.84
COL2A1-207ENST00000490609 CIAPIN1Q6FI81 312 aa20.3■□□□□ 0.84
COL2A1-207ENST00000490609 CYP4F22Q6NT55 531 aa20.3■□□□□ 0.84
COL2A1-207ENST00000490609 TRPM4Q8TD43 1214 aa20.3■□□□□ 0.84
COL2A1-207ENST00000490609 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
COL2A1-207ENST00000490609 TLL2Q9Y6L7 1015 aa20.3■□□□□ 0.84
COL2A1-207ENST00000490609 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
COL2A1-207ENST00000490609 DLK2Q6UY11 383 aa20.29■□□□□ 0.84
COL2A1-207ENST00000490609 GLIS2Q9BZE0 524 aaPredicted RBP20.29■□□□□ 0.84
COL2A1-207ENST00000490609 KCNQ5Q9NR82 932 aa20.29■□□□□ 0.84
COL2A1-207ENST00000490609 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
COL2A1-207ENST00000490609 CAPNS2Q96L46 248 aa20.28■□□□□ 0.84
COL2A1-207ENST00000490609 PHAXQ9H814 394 aaKnown RBP20.28■□□□□ 0.84
COL2A1-207ENST00000490609 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
COL2A1-207ENST00000490609 EGFRP00533 1210 aa20.27■□□□□ 0.84
COL2A1-207ENST00000490609 GPSM2P81274 684 aa20.27■□□□□ 0.84
COL2A1-207ENST00000490609 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
COL2A1-207ENST00000490609 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
COL2A1-207ENST00000490609 SAPCD2Q86UD0 394 aa20.27■□□□□ 0.84
COL2A1-207ENST00000490609 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
COL2A1-207ENST00000490609 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
COL2A1-207ENST00000490609 ZBTB12Q9Y330 459 aaPredicted RBP20.27■□□□□ 0.84
COL2A1-207ENST00000490609 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
COL2A1-207ENST00000490609 PSME4Q14997 1843 aa20.26■□□□□ 0.83
COL2A1-207ENST00000490609 AOC2O75106 756 aa20.26■□□□□ 0.83
COL2A1-207ENST00000490609 AIDAQ96BJ3 306 aa20.26■□□□□ 0.83
COL2A1-207ENST00000490609 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
COL2A1-207ENST00000490609 CDHR2Q9BYE9 1310 aa20.26■□□□□ 0.83
COL2A1-207ENST00000490609 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
COL2A1-207ENST00000490609 APAF1O14727 1248 aa20.25■□□□□ 0.83
COL2A1-207ENST00000490609 MAP2K1Q02750 393 aaPredicted RBP20.25■□□□□ 0.83
COL2A1-207ENST00000490609 TMC4Q7Z404 712 aa20.25■□□□□ 0.83
COL2A1-207ENST00000490609 GPR101Q96P66 508 aaPredicted RBP20.25■□□□□ 0.83
COL2A1-207ENST00000490609 PSMD14O00487 310 aa20.24■□□□□ 0.83
COL2A1-207ENST00000490609 IRS4O14654 1257 aaPredicted RBP20.24■□□□□ 0.83
COL2A1-207ENST00000490609 CELF2O95319 508 aaKnown RBP20.24■□□□□ 0.83
COL2A1-207ENST00000490609 TNIP1Q15025 636 aa20.24■□□□□ 0.83
COL2A1-207ENST00000490609 C8orf58Q8NAV2 365 aa20.24■□□□□ 0.83
COL2A1-207ENST00000490609 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
COL2A1-207ENST00000490609 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
COL2A1-207ENST00000490609 SEC31BQ9NQW1 1179 aa20.24■□□□□ 0.83
COL2A1-207ENST00000490609 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
COL2A1-207ENST00000490609 ELL2O00472 640 aaPredicted RBP20.23■□□□□ 0.83
COL2A1-207ENST00000490609 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
COL2A1-207ENST00000490609 MICALL2Q8IY33 904 aa20.23■□□□□ 0.83
COL2A1-207ENST00000490609 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 RPS8P62241 208 aaKnown RBP20.22■□□□□ 0.83
COL2A1-207ENST00000490609 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 DPF2Q92785 391 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
COL2A1-207ENST00000490609 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 IFT57Q9NWB7 429 aa20.22■□□□□ 0.83
COL2A1-207ENST00000490609 ZNF646O15015 1829 aaPredicted RBP20.22■□□□□ 0.83
COL2A1-207ENST00000490609 TNRC18O15417 2968 aaPredicted RBP20.22■□□□□ 0.83
COL2A1-207ENST00000490609 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
COL2A1-207ENST00000490609 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
COL2A1-207ENST00000490609 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
COL2A1-207ENST00000490609 MYH3P11055 1940 aa20.21■□□□□ 0.83
COL2A1-207ENST00000490609 ECE1P42892 770 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 GRM1Q13255 1194 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 HHIPL1Q96JK4 782 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms