RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
TNFRSF1B-202ENST00000489921 PNMA8AQ86V59 439 aaPredicted RBP25.15■■□□□ 1.62
TNFRSF1B-202ENST00000489921 MPNDQ8N594 471 aa25.15■■□□□ 1.62
TNFRSF1B-202ENST00000489921 EPS15P42566 896 aa25.14■■□□□ 1.62
TNFRSF1B-202ENST00000489921 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF1B-202ENST00000489921 DPP8Q6V1X1 898 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF1B-202ENST00000489921 NIM1KQ8IY84 436 aa25.14■■□□□ 1.62
TNFRSF1B-202ENST00000489921 CCDC27Q2M243 656 aa25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 RIC3Q7Z5B4 369 aa25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 SUPT20HQ8NEM7 779 aa25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CELF1Q92879 486 aaKnown RBP25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 TMX4Q9H1E5 349 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CLEC11AQ9Y240 323 aa25.13■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CXCL9Q07325 125 aa25.12■■□□□ 1.61
TNFRSF1B-202ENST00000489921 KIAA2012Q0VF49 1180 aa25.12■■□□□ 1.61
TNFRSF1B-202ENST00000489921 MAP1SQ66K74 1059 aaPredicted RBP25.12■■□□□ 1.61
TNFRSF1B-202ENST00000489921 TSR2Q969E8 191 aaKnown RBP25.12■■□□□ 1.61
TNFRSF1B-202ENST00000489921 ZNRF3Q9ULT6 936 aa25.12■■□□□ 1.61
TNFRSF1B-202ENST00000489921 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CNTROBQ8N137 903 aa25.11■■□□□ 1.61
TNFRSF1B-202ENST00000489921 IRS4O14654 1257 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 GOLGA2Q08379 1002 aa25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 TMC4Q7Z404 712 aa25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 ZBTB38Q8NAP3 1195 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 MYD88Q99836 296 aa25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 MKRN1Q9UHC7 482 aaKnown RBP25.1■■□□□ 1.61
TNFRSF1B-202ENST00000489921 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CCDC30Q5VVM6 783 aa25.09■■□□□ 1.61
TNFRSF1B-202ENST00000489921 LMOD1P29536 600 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF1B-202ENST00000489921 COL13A1Q5TAT6 717 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF1B-202ENST00000489921 CNTNAP1P78357 1384 aa25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 TMEM88BA6NKF7 163 aa25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 YDJCA8MPS7 323 aa25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 CCDC191Q8NCU4 936 aa25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 METTL22Q9BUU2 404 aaPredicted RBP25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 GPRC5DQ9NZD1 345 aa25.07■■□□□ 1.6
TNFRSF1B-202ENST00000489921 HSPA1AP0DMV8 641 aaKnown RBP25.06■■□□□ 1.6
TNFRSF1B-202ENST00000489921 HSPA1BP0DMV9 641 aaKnown RBP25.06■■□□□ 1.6
TNFRSF1B-202ENST00000489921 USP50Q70EL3 339 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF1B-202ENST00000489921 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 PCCAP05165 728 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 GPSM2P81274 684 aa25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 FMR1Q06787 632 aaKnown RBP eCLIP25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 NCBP3Q53F19 620 aaKnown RBP25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 JARID2Q92833 1246 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 SEC31BQ9NQW1 1179 aa25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 POLLQ9UGP5 575 aa25.05■■□□□ 1.6
TNFRSF1B-202ENST00000489921 RAD17O75943 681 aa25.04■■□□□ 1.6
TNFRSF1B-202ENST00000489921 GMPSP49915 693 aaPredicted RBP25.04■■□□□ 1.6
TNFRSF1B-202ENST00000489921 RPS8P62241 208 aaKnown RBP25.04■■□□□ 1.6
TNFRSF1B-202ENST00000489921 NSFL1CQ9UNZ2 370 aaKnown RBP25.04■■□□□ 1.6
TNFRSF1B-202ENST00000489921 IGKV5-2P06315 115 aa25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 CIAPIN1Q6FI81 312 aa25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 MRS2Q9HD23 443 aa25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 ADARB2Q9NS39 739 aaKnown RBP25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 CWC25Q9NXE8 425 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 MAP3K2Q9Y2U5 619 aa25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 IL16Q14005 1332 aa25.03■■□□□ 1.6
TNFRSF1B-202ENST00000489921 PI4KAP2A4QPH2 592 aa25.02■■□□□ 1.6
TNFRSF1B-202ENST00000489921 KSR2Q6VAB6 950 aa25.02■■□□□ 1.6
TNFRSF1B-202ENST00000489921 G2E3Q7L622 706 aa25.02■■□□□ 1.6
TNFRSF1B-202ENST00000489921 PI4KAP1Q8N8J0 262 aa25.02■■□□□ 1.6
TNFRSF1B-202ENST00000489921 CHMP4AQ9BY43 222 aa25.02■■□□□ 1.6
TNFRSF1B-202ENST00000489921 TRPM7Q96QT4 1865 aa25.01■■□□□ 1.59
TNFRSF1B-202ENST00000489921 DDX58O95786 925 aaKnown RBP25.01■■□□□ 1.59
TNFRSF1B-202ENST00000489921 VEGFBP49765 207 aa25.01■■□□□ 1.59
TNFRSF1B-202ENST00000489921 WASHC4Q2M389 1173 aa25.01■■□□□ 1.59
TNFRSF1B-202ENST00000489921 HIRAP54198 1017 aaPredicted RBP25■■□□□ 1.59
TNFRSF1B-202ENST00000489921 TWISTNBQ3B726 338 aaPredicted RBP25■■□□□ 1.59
TNFRSF1B-202ENST00000489921 SHTN1A0MZ66 631 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 RASSF10A6NK89 507 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 PDE8AO60658 829 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 TNIP1Q15025 636 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 TBC1D16Q8TBP0 767 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CDHR2Q9BYE9 1310 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 KCNQ5Q9NR82 932 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 PODXL2Q9NZ53 605 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 PGAP2Q9UHJ9 254 aa24.99■■□□□ 1.59
TNFRSF1B-202ENST00000489921 TRAF5O00463 557 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 RIMBP2O15034 1052 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 ANP32CO43423 234 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CST9Q5W186 159 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 GPR101Q96P66 508 aaPredicted RBP24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 DBNDD1Q9H9R9 158 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 SCN9AQ15858 1988 aa24.98■■□□□ 1.59
TNFRSF1B-202ENST00000489921 MYH3P11055 1940 aa24.97■■□□□ 1.59
TNFRSF1B-202ENST00000489921 C6orf229H3BNL8 230 aa24.97■■□□□ 1.59
TNFRSF1B-202ENST00000489921 HSP90B1P14625 803 aaKnown RBP24.97■■□□□ 1.59
TNFRSF1B-202ENST00000489921 FANCIQ9NVI1 1328 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 PSMD14O00487 310 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 SLC4A2P04920 1241 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CWF19L2Q2TBE0 894 aaKnown RBP24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CCDC152Q4G0S7 254 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CCDC85AQ96PX6 553 aaPredicted RBP24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 STK31Q9BXU1 1019 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CNOT7Q9UIV1 285 aaKnown RBP24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 ZBTB12Q9Y330 459 aaPredicted RBP24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 CACNA1FO60840 1977 aa24.96■■□□□ 1.59
TNFRSF1B-202ENST00000489921 RTL9Q8NET4 1388 aa24.95■■□□□ 1.59
TNFRSF1B-202ENST00000489921 DOK7Q18PE1 504 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms