RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
CCL28-202ENST00000489442 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
CCL28-202ENST00000489442 F6X3S4 739 aa17.01■□□□□ 0.31
CCL28-202ENST00000489442 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
CCL28-202ENST00000489442 PSMD1Q99460 953 aa17.01■□□□□ 0.31
CCL28-202ENST00000489442 MYH3P11055 1940 aa17.01■□□□□ 0.31
CCL28-202ENST00000489442 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
CCL28-202ENST00000489442 GCKRQ14397 625 aa17■□□□□ 0.31
CCL28-202ENST00000489442 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
CCL28-202ENST00000489442 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
CCL28-202ENST00000489442 TMC4Q7Z404 712 aa17■□□□□ 0.31
CCL28-202ENST00000489442 SP8Q8IXZ3 490 aa17■□□□□ 0.31
CCL28-202ENST00000489442 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
CCL28-202ENST00000489442 CDHR2Q9BYE9 1310 aa17■□□□□ 0.31
CCL28-202ENST00000489442 GLTPD2A6NH11 291 aa16.99■□□□□ 0.31
CCL28-202ENST00000489442 MPNDQ8N594 471 aa16.99■□□□□ 0.31
CCL28-202ENST00000489442 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
CCL28-202ENST00000489442 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
CCL28-202ENST00000489442 CCDC85AQ96PX6 553 aaPredicted RBP16.99■□□□□ 0.31
CCL28-202ENST00000489442 NMRK2Q9NPI5 230 aa16.99■□□□□ 0.31
CCL28-202ENST00000489442 H7C1W4 665 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
CCL28-202ENST00000489442 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
CCL28-202ENST00000489442 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
CCL28-202ENST00000489442 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
CCL28-202ENST00000489442 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
CCL28-202ENST00000489442 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
CCL28-202ENST00000489442 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
CCL28-202ENST00000489442 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
CCL28-202ENST00000489442 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
CCL28-202ENST00000489442 LARGE2Q8N3Y3 721 aa16.97■□□□□ 0.31
CCL28-202ENST00000489442 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
CCL28-202ENST00000489442 CTSWP56202 376 aa16.96■□□□□ 0.31
CCL28-202ENST00000489442 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
CCL28-202ENST00000489442 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
CCL28-202ENST00000489442 PTPRCP08575 1304 aa16.96■□□□□ 0.31
CCL28-202ENST00000489442 KIF3CO14782 793 aa16.96■□□□□ 0.3
CCL28-202ENST00000489442 PPIP5K2O43314 1243 aa16.96■□□□□ 0.3
CCL28-202ENST00000489442 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.3
CCL28-202ENST00000489442 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.3
CCL28-202ENST00000489442 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.3
CCL28-202ENST00000489442 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.3
CCL28-202ENST00000489442 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
CCL28-202ENST00000489442 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
CCL28-202ENST00000489442 VPS33BQ9H267 617 aa16.95■□□□□ 0.3
CCL28-202ENST00000489442 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
CCL28-202ENST00000489442 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
CCL28-202ENST00000489442 DDNO94850 711 aaPredicted RBP16.94■□□□□ 0.3
CCL28-202ENST00000489442 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
CCL28-202ENST00000489442 AOC3Q16853 763 aa16.94■□□□□ 0.3
CCL28-202ENST00000489442 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
CCL28-202ENST00000489442 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 GRM8O00222 908 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 TOMM70O94826 608 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
CCL28-202ENST00000489442 GREM2Q9H772 168 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 ANKIB1Q9P2G1 1089 aa16.93■□□□□ 0.3
CCL28-202ENST00000489442 CASP7P55210 303 aa16.92■□□□□ 0.3
CCL28-202ENST00000489442 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
CCL28-202ENST00000489442 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
CCL28-202ENST00000489442 LRRC37AA6NMS7 1700 aa16.91■□□□□ 0.3
CCL28-202ENST00000489442 FZD9O00144 591 aa16.91■□□□□ 0.3
CCL28-202ENST00000489442 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
CCL28-202ENST00000489442 GPSM2P81274 684 aa16.91■□□□□ 0.3
CCL28-202ENST00000489442 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 COL4A1P02462 1669 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 ITGA6P23229 1130 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
CCL28-202ENST00000489442 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 EYA3Q99504 573 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
CCL28-202ENST00000489442 GJA3Q9Y6H8 435 aa16.9■□□□□ 0.3
CCL28-202ENST00000489442 WDR90Q96KV7 1748 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 CSF1RP07333 972 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 GPC2Q8N158 579 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 MPHOSPH8Q99549 860 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
CCL28-202ENST00000489442 ZNRF3Q9ULT6 936 aa16.89■□□□□ 0.29
CCL28-202ENST00000489442 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 G3V3G9 751 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 IFIT5Q13325 482 aaKnown RBP16.88■□□□□ 0.29
CCL28-202ENST00000489442 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
CCL28-202ENST00000489442 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
CCL28-202ENST00000489442 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
CCL28-202ENST00000489442 POLLQ9UGP5 575 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 GGA1Q9UJY5 639 aa16.88■□□□□ 0.29
CCL28-202ENST00000489442 XDHP47989 1333 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms