RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 WDR90Q96KV7 1748 aa27.09■■□□□ 1.93
LIME1-207ENST00000489212 NEURL1BA8MQ27 555 aa27.08■■□□□ 1.93
LIME1-207ENST00000489212 NEXNQ0ZGT2 675 aa27.08■■□□□ 1.93
LIME1-207ENST00000489212 SP8Q8IXZ3 490 aa27.08■■□□□ 1.93
LIME1-207ENST00000489212 CELF1Q92879 486 aaKnown RBP27.08■■□□□ 1.93
LIME1-207ENST00000489212 DDNO94850 711 aaPredicted RBP27.07■■□□□ 1.92
LIME1-207ENST00000489212 DIEXFQ68CQ4 756 aaKnown RBP27.07■■□□□ 1.92
LIME1-207ENST00000489212 ZNF541Q9H0D2 1346 aa27.07■■□□□ 1.92
LIME1-207ENST00000489212 E9PSI1 815 aa27.06■■□□□ 1.92
LIME1-207ENST00000489212 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
LIME1-207ENST00000489212 FZD9O00144 591 aa27.05■■□□□ 1.92
LIME1-207ENST00000489212 VEGFAP15692 232 aaPredicted RBP27.05■■□□□ 1.92
LIME1-207ENST00000489212 SLFN5Q08AF3 891 aa27.05■■□□□ 1.92
LIME1-207ENST00000489212 MIER1Q8N108 512 aa27.05■■□□□ 1.92
LIME1-207ENST00000489212 CDCA7LQ96GN5 454 aa27.05■■□□□ 1.92
LIME1-207ENST00000489212 TMX4Q9H1E5 349 aaPredicted RBP27.05■■□□□ 1.92
LIME1-207ENST00000489212 CDHR2Q9BYE9 1310 aa27.05■■□□□ 1.92
LIME1-207ENST00000489212 LRRC37AA6NMS7 1700 aa27.04■■□□□ 1.92
LIME1-207ENST00000489212 CEP350Q5VT06 3117 aa27.04■■□□□ 1.92
LIME1-207ENST00000489212 PDE8AO60658 829 aa27.04■■□□□ 1.92
LIME1-207ENST00000489212 C16orf71Q8IYS4 520 aaPredicted RBP27.04■■□□□ 1.92
LIME1-207ENST00000489212 RBM46Q8TBY0 533 aaKnown RBP27.04■■□□□ 1.92
LIME1-207ENST00000489212 SEC31BQ9NQW1 1179 aa27.04■■□□□ 1.92
LIME1-207ENST00000489212 HSP90B1P14625 803 aaKnown RBP27.03■■□□□ 1.92
LIME1-207ENST00000489212 TMC4Q7Z404 712 aa27.03■■□□□ 1.92
LIME1-207ENST00000489212 RTFDC1Q9BY42 306 aaPredicted RBP27.03■■□□□ 1.92
LIME1-207ENST00000489212 F6X3S4 739 aa27.02■■□□□ 1.92
LIME1-207ENST00000489212 GCKRQ14397 625 aa27.02■■□□□ 1.92
LIME1-207ENST00000489212 DPP8Q6V1X1 898 aaPredicted RBP27.02■■□□□ 1.92
LIME1-207ENST00000489212 LARGE2Q8N3Y3 721 aa27.02■■□□□ 1.92
LIME1-207ENST00000489212 MPNDQ8N594 471 aa27.02■■□□□ 1.92
LIME1-207ENST00000489212 CCDC85AQ96PX6 553 aaPredicted RBP27.02■■□□□ 1.92
LIME1-207ENST00000489212 H7C1W4 665 aa27.01■■□□□ 1.91
LIME1-207ENST00000489212 JDP2Q8WYK2 163 aa27.01■■□□□ 1.91
LIME1-207ENST00000489212 DUOX1Q9NRD9 1551 aa27.01■■□□□ 1.91
LIME1-207ENST00000489212 PPIP5K2O43314 1243 aa27■■□□□ 1.91
LIME1-207ENST00000489212 HSPA6P17066 643 aa27■■□□□ 1.91
LIME1-207ENST00000489212 RPS8P62241 208 aaKnown RBP27■■□□□ 1.91
LIME1-207ENST00000489212 AOC3Q16853 763 aa27■■□□□ 1.91
LIME1-207ENST00000489212 CCDC152Q4G0S7 254 aa27■■□□□ 1.91
LIME1-207ENST00000489212 LINS1Q8NG48 757 aa27■■□□□ 1.91
LIME1-207ENST00000489212 UBE3BQ7Z3V4 1068 aa26.99■■□□□ 1.91
LIME1-207ENST00000489212 L3MBTL3Q96JM7 780 aaPredicted RBP26.99■■□□□ 1.91
LIME1-207ENST00000489212 MYH3P11055 1940 aa26.98■■□□□ 1.91
LIME1-207ENST00000489212 CASP7P55210 303 aa26.98■■□□□ 1.91
LIME1-207ENST00000489212 CTSWP56202 376 aa26.98■■□□□ 1.91
LIME1-207ENST00000489212 TRMT2AQ8IZ69 625 aaKnown RBP26.98■■□□□ 1.91
LIME1-207ENST00000489212 SUPT20HQ8NEM7 779 aa26.98■■□□□ 1.91
LIME1-207ENST00000489212 BEND3Q5T5X7 828 aa26.97■■□□□ 1.91
LIME1-207ENST00000489212 VPS33BQ9H267 617 aa26.97■■□□□ 1.91
LIME1-207ENST00000489212 GPSM2P81274 684 aa26.96■■□□□ 1.91
LIME1-207ENST00000489212 NIM1KQ8IY84 436 aa26.96■■□□□ 1.91
LIME1-207ENST00000489212 MRPL50Q8N5N7 158 aaKnown RBP26.96■■□□□ 1.91
LIME1-207ENST00000489212 TTLL11Q8NHH1 800 aa26.96■■□□□ 1.91
LIME1-207ENST00000489212 LTBP1Q14766 1721 aa26.96■■□□□ 1.91
LIME1-207ENST00000489212 KIAA2012Q0VF49 1180 aa26.95■■□□□ 1.9
LIME1-207ENST00000489212 FSTL1Q12841 308 aa26.95■■□□□ 1.9
LIME1-207ENST00000489212 NSFL1CQ9UNZ2 370 aaKnown RBP26.95■■□□□ 1.9
LIME1-207ENST00000489212 SCN4AP35499 1836 aa26.95■■□□□ 1.9
LIME1-207ENST00000489212 EIF6P56537 245 aaKnown RBP26.94■■□□□ 1.9
LIME1-207ENST00000489212 GPC2Q8N158 579 aa26.94■■□□□ 1.9
LIME1-207ENST00000489212 GREM2Q9H772 168 aa26.94■■□□□ 1.9
LIME1-207ENST00000489212 SMC1BQ8NDV3 1235 aa26.93■■□□□ 1.9
LIME1-207ENST00000489212 SSH1Q8WYL5 1049 aa26.93■■□□□ 1.9
LIME1-207ENST00000489212 PLA2G12BQ9BX93 195 aa26.93■■□□□ 1.9
LIME1-207ENST00000489212 POLLQ9UGP5 575 aa26.93■■□□□ 1.9
LIME1-207ENST00000489212 POTEIP0CG38 1075 aa26.92■■□□□ 1.9
LIME1-207ENST00000489212 POTEJP0CG39 1038 aa26.92■■□□□ 1.9
LIME1-207ENST00000489212 GJA3Q9Y6H8 435 aa26.92■■□□□ 1.9
LIME1-207ENST00000489212 IQCA1LA6NCM1 817 aa26.91■■□□□ 1.9
LIME1-207ENST00000489212 TAF1DQ9H5J8 278 aaPredicted RBP26.91■■□□□ 1.9
LIME1-207ENST00000489212 RTL9Q8NET4 1388 aa26.91■■□□□ 1.9
LIME1-207ENST00000489212 ANKRD18AQ8IVF6 992 aa26.9■■□□□ 1.9
LIME1-207ENST00000489212 ZNRF3Q9ULT6 936 aa26.9■■□□□ 1.9
LIME1-207ENST00000489212 SLC4A10Q6U841 1118 aa26.89■■□□□ 1.9
LIME1-207ENST00000489212 TBC1D16Q8TBP0 767 aa26.89■■□□□ 1.9
LIME1-207ENST00000489212 GPR101Q96P66 508 aaPredicted RBP26.89■■□□□ 1.9
LIME1-207ENST00000489212 BCL2L13Q9BXK5 485 aa26.89■■□□□ 1.9
LIME1-207ENST00000489212 HACL1Q9UJ83 578 aa26.89■■□□□ 1.9
LIME1-207ENST00000489212 SPEF2Q9C093 1822 aa26.88■■□□□ 1.89
LIME1-207ENST00000489212 C6orf229H3BNL8 230 aa26.88■■□□□ 1.89
LIME1-207ENST00000489212 CSF1RP07333 972 aa26.88■■□□□ 1.89
LIME1-207ENST00000489212 CXCL9Q07325 125 aa26.88■■□□□ 1.89
LIME1-207ENST00000489212 CDC5LQ99459 802 aaKnown RBP26.88■■□□□ 1.89
LIME1-207ENST00000489212 PODXL2Q9NZ53 605 aa26.88■■□□□ 1.89
LIME1-207ENST00000489212 YDJCA8MPS7 323 aa26.87■■□□□ 1.89
LIME1-207ENST00000489212 RIMBP2O15034 1052 aa26.87■■□□□ 1.89
LIME1-207ENST00000489212 WASHC4Q2M389 1173 aa26.87■■□□□ 1.89
LIME1-207ENST00000489212 FAM161AQ3B820 660 aa26.87■■□□□ 1.89
LIME1-207ENST00000489212 ALDH1L1O75891 902 aa26.86■■□□□ 1.89
LIME1-207ENST00000489212 EPHX2P34913 555 aa26.86■■□□□ 1.89
LIME1-207ENST00000489212 SCNN1DP51172 638 aa26.86■■□□□ 1.89
LIME1-207ENST00000489212 APLP1P51693 650 aa26.86■■□□□ 1.89
LIME1-207ENST00000489212 ANKIB1Q9P2G1 1089 aa26.86■■□□□ 1.89
LIME1-207ENST00000489212 GRM8O00222 908 aa26.85■■□□□ 1.89
LIME1-207ENST00000489212 FOXO4P98177 505 aa26.85■■□□□ 1.89
LIME1-207ENST00000489212 ALDH1L2Q3SY69 923 aa26.85■■□□□ 1.89
LIME1-207ENST00000489212 SRCIN1Q9C0H9 1055 aa26.85■■□□□ 1.89
LIME1-207ENST00000489212 BSDC1Q9NW68 430 aaPredicted RBP26.85■■□□□ 1.89
LIME1-207ENST00000489212 PTPRCP08575 1304 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms