RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 MYH14Q7Z406 1995 aaKnown RBP22■■□□□ 1.11
POLR2J3-205ENST00000489144 CCDC8Q9H0W5 538 aaPredicted RBP22■■□□□ 1.11
POLR2J3-205ENST00000489144 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
POLR2J3-205ENST00000489144 UPF2Q9HAU5 1272 aaKnown RBP22■■□□□ 1.11
POLR2J3-205ENST00000489144 RAB11FIP3O75154 756 aa21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 CCDC173Q0VFZ6 552 aa21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 G3BP1Q13283 466 aaKnown RBP eCLIP21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 DNTTIP2Q5QJE6 756 aaKnown RBP21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 CCDC191Q8NCU4 936 aa21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 GIGYF2Q6Y7W6 1299 aaKnown RBP21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 AACSQ86V21 672 aa21.99■■□□□ 1.11
POLR2J3-205ENST00000489144 CDC45O75419 566 aa21.98■■□□□ 1.11
POLR2J3-205ENST00000489144 PTPN12Q05209 780 aaKnown RBP21.98■■□□□ 1.11
POLR2J3-205ENST00000489144 TBC1D32Q96NH3 1257 aa21.98■■□□□ 1.11
POLR2J3-205ENST00000489144 PPP1R9BQ96SB3 815 aa21.98■■□□□ 1.11
POLR2J3-205ENST00000489144 RFX5P48382 616 aaPredicted RBP21.97■■□□□ 1.11
POLR2J3-205ENST00000489144 C22orf23Q9BZE7 217 aa21.97■■□□□ 1.11
POLR2J3-205ENST00000489144 IL6STP40189 918 aaPredicted RBP21.97■■□□□ 1.11
POLR2J3-205ENST00000489144 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
POLR2J3-205ENST00000489144 UBN2Q6ZU65 1347 aa21.96■■□□□ 1.11
POLR2J3-205ENST00000489144 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
POLR2J3-205ENST00000489144 NLRP10Q86W26 655 aa21.96■■□□□ 1.11
POLR2J3-205ENST00000489144 EAF2Q96CJ1 260 aaPredicted RBP21.96■■□□□ 1.11
POLR2J3-205ENST00000489144 HDAC5Q9UQL6 1122 aa21.96■■□□□ 1.11
POLR2J3-205ENST00000489144 IRX3P78415 501 aaPredicted RBP21.95■■□□□ 1.11
POLR2J3-205ENST00000489144 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.11
POLR2J3-205ENST00000489144 RGS22Q8NE09 1264 aa21.95■■□□□ 1.11
POLR2J3-205ENST00000489144 ATRNO75882 1429 aa21.95■■□□□ 1.1
POLR2J3-205ENST00000489144 TFCP2Q12800 502 aa21.95■■□□□ 1.1
POLR2J3-205ENST00000489144 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
POLR2J3-205ENST00000489144 AMIGO3Q86WK7 504 aa21.95■■□□□ 1.1
POLR2J3-205ENST00000489144 IFIT2P09913 472 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 HSP90AB4PQ58FF6 505 aa21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 PI4K2BQ8TCG2 481 aa21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 PUS3Q9BZE2 481 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 OSBPL3Q9H4L5 887 aa21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 LRRC24Q50LG9 513 aa21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
POLR2J3-205ENST00000489144 BTAF1O14981 1849 aa21.93■■□□□ 1.1
POLR2J3-205ENST00000489144 BICDL1Q6ZP65 573 aa21.93■■□□□ 1.1
POLR2J3-205ENST00000489144 CCNL1Q9UK58 526 aaPredicted RBP21.92■■□□□ 1.1
POLR2J3-205ENST00000489144 NUP98P52948 1817 aa21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 ZNF500O60304 480 aaPredicted RBP21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 HCLS1P14317 486 aaPredicted RBP21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 STAP2Q9UGK3 403 aa21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 IL25Q9H293 177 aa21.91■■□□□ 1.1
POLR2J3-205ENST00000489144 PHF14O94880 888 aa21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 SUSD4Q5VX71 490 aa21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 COPRSQ9NQ92 184 aa21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 COL15A1P39059 1388 aa21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 SPRYD3Q8NCJ5 442 aa21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
POLR2J3-205ENST00000489144 ZBTB22O15209 634 aa21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 ERC1Q8IUD2 1116 aa21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 DDX11L8A8MPP1 907 aa21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 GNPATO15228 680 aa21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 GAS2L3Q86XJ1 694 aa21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 EDC3Q96F86 508 aaKnown RBP21.89■■□□□ 1.09
POLR2J3-205ENST00000489144 IRS4O14654 1257 aaPredicted RBP21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 TRIM37O94972 964 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 SLC20A2Q08357 652 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 BOLA2Q9H3K6 86 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 GREM2Q9H772 168 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 RNF216Q9NWF9 866 aaPredicted RBP21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 NIP7Q9Y221 180 aaKnown RBP eCLIP21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 HS1BP3Q53T59 392 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 CGNQ9P2M7 1197 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-205ENST00000489144 GOLGB1Q14789 3259 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 CBX1P83916 185 aa21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 CSPP1Q1MSJ5 1256 aa21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 SASS6Q6UVJ0 657 aa21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 TRIM28Q13263 835 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-205ENST00000489144 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 TIMM10P62072 90 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 CCDC57Q2TAC2 916 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 ZNF34Q8IZ26 560 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 DBNDD2Q9BQY9 259 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 DBNLQ9UJU6 430 aaKnown RBP21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 NEUROD6Q96NK8 337 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 ECHDC1Q9NTX5 307 aa21.86■■□□□ 1.09
POLR2J3-205ENST00000489144 ERVV-1B6SEH8 477 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 HSP90AB3PQ58FF7 597 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 TNNI3KQ59H18 835 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 LRRC4BQ9NT99 713 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 FPGT-TNNI3KV9GXZ4 949 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 TUBGCP6Q96RT7 1819 aa21.85■■□□□ 1.09
POLR2J3-205ENST00000489144 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
POLR2J3-205ENST00000489144 CHMLP26374 656 aa21.84■■□□□ 1.09
POLR2J3-205ENST00000489144 KRT27Q7Z3Y8 459 aa21.84■■□□□ 1.09
POLR2J3-205ENST00000489144 CHMP5Q9NZZ3 219 aa21.84■■□□□ 1.09
POLR2J3-205ENST00000489144 BRWD3Q6RI45 1802 aa21.84■■□□□ 1.09
POLR2J3-205ENST00000489144 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms