RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PCCAP05165 728 aaPredicted RBP32.07■■■□□ 2.72
HMGN1-217ENST00000489072 IGKV5-2P06315 115 aa32.07■■■□□ 2.72
HMGN1-217ENST00000489072 SP8Q8IXZ3 490 aa32.07■■■□□ 2.72
HMGN1-217ENST00000489072 JARID2Q92833 1246 aaPredicted RBP32.07■■■□□ 2.72
HMGN1-217ENST00000489072 MYH16Q9H6N6 1097 aa32.07■■■□□ 2.72
HMGN1-217ENST00000489072 LRRC37AA6NMS7 1700 aa32.06■■■□□ 2.72
HMGN1-217ENST00000489072 FZD9O00144 591 aa32.06■■■□□ 2.72
HMGN1-217ENST00000489072 FSTL1Q12841 308 aa32.05■■■□□ 2.72
HMGN1-217ENST00000489072 FLIIQ13045 1269 aa32.05■■■□□ 2.72
HMGN1-217ENST00000489072 TMX4Q9H1E5 349 aaPredicted RBP32.05■■■□□ 2.72
HMGN1-217ENST00000489072 CELF1Q92879 486 aaKnown RBP32.04■■■□□ 2.72
HMGN1-217ENST00000489072 LARGE2Q8N3Y3 721 aa32.03■■■□□ 2.72
HMGN1-217ENST00000489072 JDP2Q8WYK2 163 aa32.03■■■□□ 2.72
HMGN1-217ENST00000489072 L3MBTL3Q96JM7 780 aaPredicted RBP32.03■■■□□ 2.72
HMGN1-217ENST00000489072 RTFDC1Q9BY42 306 aaPredicted RBP32.03■■■□□ 2.72
HMGN1-217ENST00000489072 SCN4AP35499 1836 aa32.03■■■□□ 2.72
HMGN1-217ENST00000489072 SMC1BQ8NDV3 1235 aa32.02■■■□□ 2.72
HMGN1-217ENST00000489072 CWF19L2Q2TBE0 894 aaKnown RBP32.01■■■□□ 2.71
HMGN1-217ENST00000489072 DPP8Q6V1X1 898 aaPredicted RBP32.01■■■□□ 2.71
HMGN1-217ENST00000489072 MPNDQ8N594 471 aa32.01■■■□□ 2.71
HMGN1-217ENST00000489072 DUOX1Q9NRD9 1551 aa32.01■■■□□ 2.71
HMGN1-217ENST00000489072 NEXNQ0ZGT2 675 aa32■■■□□ 2.71
HMGN1-217ENST00000489072 AOC3Q16853 763 aa32■■■□□ 2.71
HMGN1-217ENST00000489072 TMC4Q7Z404 712 aa32■■■□□ 2.71
HMGN1-217ENST00000489072 NEURL1BA8MQ27 555 aa31.99■■■□□ 2.71
HMGN1-217ENST00000489072 PPIP5K2O43314 1243 aa31.99■■■□□ 2.71
HMGN1-217ENST00000489072 CDHR2Q9BYE9 1310 aa31.99■■■□□ 2.71
HMGN1-217ENST00000489072 PDE8AO60658 829 aa31.98■■■□□ 2.71
HMGN1-217ENST00000489072 HSP90B1P14625 803 aaKnown RBP31.98■■■□□ 2.71
HMGN1-217ENST00000489072 FKBP5Q13451 457 aaPredicted RBP31.98■■■□□ 2.71
HMGN1-217ENST00000489072 SEC31BQ9NQW1 1179 aa31.98■■■□□ 2.71
HMGN1-217ENST00000489072 MYH3P11055 1940 aa31.97■■■□□ 2.71
HMGN1-217ENST00000489072 CCER2I3L3R5 266 aa31.97■■■□□ 2.71
HMGN1-217ENST00000489072 APLP1P51693 650 aa31.97■■■□□ 2.71
HMGN1-217ENST00000489072 SUPT20HQ8NEM7 779 aa31.97■■■□□ 2.71
HMGN1-217ENST00000489072 VPS33BQ9H267 617 aa31.97■■■□□ 2.71
HMGN1-217ENST00000489072 POTEIP0CG38 1075 aa31.96■■■□□ 2.71
HMGN1-217ENST00000489072 POTEJP0CG39 1038 aa31.96■■■□□ 2.71
HMGN1-217ENST00000489072 NIM1KQ8IY84 436 aa31.96■■■□□ 2.71
HMGN1-217ENST00000489072 GPC2Q8N158 579 aa31.96■■■□□ 2.71
HMGN1-217ENST00000489072 IQCA1LA6NCM1 817 aa31.95■■■□□ 2.71
HMGN1-217ENST00000489072 EIF6P56537 245 aaKnown RBP31.95■■■□□ 2.71
HMGN1-217ENST00000489072 RPS8P62241 208 aaKnown RBP31.95■■■□□ 2.71
HMGN1-217ENST00000489072 DNAAF4Q8WXU2 420 aa31.95■■■□□ 2.71
HMGN1-217ENST00000489072 LTBP1Q14766 1721 aa31.95■■■□□ 2.7
HMGN1-217ENST00000489072 CCDC152Q4G0S7 254 aa31.94■■■□□ 2.7
HMGN1-217ENST00000489072 CCDC85AQ96PX6 553 aaPredicted RBP31.94■■■□□ 2.7
HMGN1-217ENST00000489072 TAF1DQ9H5J8 278 aaPredicted RBP31.94■■■□□ 2.7
HMGN1-217ENST00000489072 H7C1W4 665 aa31.92■■■□□ 2.7
HMGN1-217ENST00000489072 KIAA2012Q0VF49 1180 aa31.92■■■□□ 2.7
HMGN1-217ENST00000489072 GJA3Q9Y6H8 435 aa31.92■■■□□ 2.7
HMGN1-217ENST00000489072 CTSWP56202 376 aa31.91■■■□□ 2.7
HMGN1-217ENST00000489072 GPSM2P81274 684 aa31.91■■■□□ 2.7
HMGN1-217ENST00000489072 GCKRQ14397 625 aa31.91■■■□□ 2.7
HMGN1-217ENST00000489072 UBE3BQ7Z3V4 1068 aa31.91■■■□□ 2.7
HMGN1-217ENST00000489072 HACL1Q9UJ83 578 aa31.91■■■□□ 2.7
HMGN1-217ENST00000489072 HTRA3P83110 453 aa31.9■■■□□ 2.7
HMGN1-217ENST00000489072 LINS1Q8NG48 757 aa31.9■■■□□ 2.7
HMGN1-217ENST00000489072 NSFL1CQ9UNZ2 370 aaKnown RBP31.9■■■□□ 2.7
HMGN1-217ENST00000489072 F6X3S4 739 aa31.89■■■□□ 2.7
HMGN1-217ENST00000489072 ZNRF3Q9ULT6 936 aa31.89■■■□□ 2.7
HMGN1-217ENST00000489072 E9PSI1 815 aa31.88■■■□□ 2.69
HMGN1-217ENST00000489072 CHADLQ6NUI6 762 aa31.88■■■□□ 2.69
HMGN1-217ENST00000489072 TTLL11Q8NHH1 800 aa31.88■■■□□ 2.69
HMGN1-217ENST00000489072 POLLQ9UGP5 575 aa31.88■■■□□ 2.69
HMGN1-217ENST00000489072 ADAMTSL1Q8N6G6 1762 aa31.88■■■□□ 2.69
HMGN1-217ENST00000489072 EPHX2P34913 555 aa31.87■■■□□ 2.69
HMGN1-217ENST00000489072 CASP7P55210 303 aa31.87■■■□□ 2.69
HMGN1-217ENST00000489072 CXCL9Q07325 125 aa31.86■■■□□ 2.69
HMGN1-217ENST00000489072 SLFN5Q08AF3 891 aa31.86■■■□□ 2.69
HMGN1-217ENST00000489072 SPEF2Q9C093 1822 aa31.86■■■□□ 2.69
HMGN1-217ENST00000489072 SCNN1DP51172 638 aa31.85■■■□□ 2.69
HMGN1-217ENST00000489072 LDHDQ86WU2 507 aa31.85■■■□□ 2.69
HMGN1-217ENST00000489072 DNAJC5GQ8N7S2 189 aa31.85■■■□□ 2.69
HMGN1-217ENST00000489072 GREM2Q9H772 168 aa31.85■■■□□ 2.69
HMGN1-217ENST00000489072 EAPPQ56P03 285 aaPredicted RBP31.84■■■□□ 2.69
HMGN1-217ENST00000489072 BEND3Q5T5X7 828 aa31.84■■■□□ 2.69
HMGN1-217ENST00000489072 CDCA7LQ96GN5 454 aa31.84■■■□□ 2.69
HMGN1-217ENST00000489072 C6orf229H3BNL8 230 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 WASHC4Q2M389 1173 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 ANKRD18AQ8IVF6 992 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 TBC1D16Q8TBP0 767 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 GPR101Q96P66 508 aaPredicted RBP31.83■■■□□ 2.69
HMGN1-217ENST00000489072 PLA2G12BQ9BX93 195 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 PODXL2Q9NZ53 605 aa31.83■■■□□ 2.69
HMGN1-217ENST00000489072 RTL9Q8NET4 1388 aa31.82■■■□□ 2.69
HMGN1-217ENST00000489072 YDJCA8MPS7 323 aa31.82■■■□□ 2.68
HMGN1-217ENST00000489072 RIMBP2O15034 1052 aa31.81■■■□□ 2.68
HMGN1-217ENST00000489072 EPS15P42566 896 aa31.81■■■□□ 2.68
HMGN1-217ENST00000489072 RAD17O75943 681 aa31.8■■■□□ 2.68
HMGN1-217ENST00000489072 LMOD1P29536 600 aaPredicted RBP31.8■■■□□ 2.68
HMGN1-217ENST00000489072 CDC5LQ99459 802 aaKnown RBP31.8■■■□□ 2.68
HMGN1-217ENST00000489072 CIAPIN1Q6FI81 312 aa31.79■■■□□ 2.68
HMGN1-217ENST00000489072 PNMA8AQ86V59 439 aaPredicted RBP31.79■■■□□ 2.68
HMGN1-217ENST00000489072 ANKIB1Q9P2G1 1089 aa31.79■■■□□ 2.68
HMGN1-217ENST00000489072 MRPL50Q8N5N7 158 aaKnown RBP31.78■■■□□ 2.68
HMGN1-217ENST00000489072 EYA3Q99504 573 aa31.78■■■□□ 2.68
HMGN1-217ENST00000489072 DBNDD1Q9H9R9 158 aa31.78■■■□□ 2.68
HMGN1-217ENST00000489072 UFL1O94874 794 aa31.77■■■□□ 2.68
HMGN1-217ENST00000489072 TRMT2AQ8IZ69 625 aaKnown RBP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms