RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
BRCA1-218ENST00000489037 C16orf71Q8IYS4 520 aaPredicted RBP18.17■□□□□ 0.5
BRCA1-218ENST00000489037 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
BRCA1-218ENST00000489037 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
BRCA1-218ENST00000489037 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
BRCA1-218ENST00000489037 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
BRCA1-218ENST00000489037 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
BRCA1-218ENST00000489037 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
BRCA1-218ENST00000489037 JARID2Q92833 1246 aaPredicted RBP18.16■□□□□ 0.5
BRCA1-218ENST00000489037 C1QTNF8P60827 252 aa18.15■□□□□ 0.5
BRCA1-218ENST00000489037 GCKRQ14397 625 aa18.15■□□□□ 0.5
BRCA1-218ENST00000489037 JDP2Q8WYK2 163 aa18.15■□□□□ 0.5
BRCA1-218ENST00000489037 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
BRCA1-218ENST00000489037 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
BRCA1-218ENST00000489037 UBE3BQ7Z3V4 1068 aa18.14■□□□□ 0.49
BRCA1-218ENST00000489037 MPNDQ8N594 471 aa18.14■□□□□ 0.49
BRCA1-218ENST00000489037 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
BRCA1-218ENST00000489037 F6X3S4 739 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 H7C1W4 665 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 KIF3CO14782 793 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 RPS8P62241 208 aaKnown RBP18.13■□□□□ 0.49
BRCA1-218ENST00000489037 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
BRCA1-218ENST00000489037 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
BRCA1-218ENST00000489037 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 VPS33BQ9H267 617 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
BRCA1-218ENST00000489037 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
BRCA1-218ENST00000489037 CELF1Q92879 486 aaKnown RBP18.12■□□□□ 0.49
BRCA1-218ENST00000489037 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
BRCA1-218ENST00000489037 CTSWP56202 376 aa18.11■□□□□ 0.49
BRCA1-218ENST00000489037 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
BRCA1-218ENST00000489037 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
BRCA1-218ENST00000489037 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
BRCA1-218ENST00000489037 PTPRCP08575 1304 aa18.11■□□□□ 0.49
BRCA1-218ENST00000489037 SNED1Q8TER0 1413 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 PPIP5K2O43314 1243 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 TOMM70O94826 608 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 EIF6P56537 245 aaKnown RBP18.1■□□□□ 0.49
BRCA1-218ENST00000489037 ANKRD18AQ8IVF6 992 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 NIM1KQ8IY84 436 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
BRCA1-218ENST00000489037 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
BRCA1-218ENST00000489037 C9orf78Q9NZ63 289 aaPredicted RBP18.1■□□□□ 0.49
BRCA1-218ENST00000489037 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
BRCA1-218ENST00000489037 TTLL11Q8NHH1 800 aa18.09■□□□□ 0.49
BRCA1-218ENST00000489037 RTFDC1Q9BY42 306 aaPredicted RBP18.09■□□□□ 0.49
BRCA1-218ENST00000489037 NSFL1CQ9UNZ2 370 aaKnown RBP18.09■□□□□ 0.49
BRCA1-218ENST00000489037 DDNO94850 711 aaPredicted RBP18.08■□□□□ 0.48
BRCA1-218ENST00000489037 PLA2G12BQ9BX93 195 aa18.08■□□□□ 0.48
BRCA1-218ENST00000489037 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.48
BRCA1-218ENST00000489037 LRRC37AA6NMS7 1700 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 FZD9O00144 591 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 AOC3Q16853 763 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 EYA3Q99504 573 aa18.07■□□□□ 0.48
BRCA1-218ENST00000489037 IQCA1LA6NCM1 817 aa18.06■□□□□ 0.48
BRCA1-218ENST00000489037 GRM8O00222 908 aa18.06■□□□□ 0.48
BRCA1-218ENST00000489037 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
BRCA1-218ENST00000489037 SLC51AQ86UW1 340 aa18.06■□□□□ 0.48
BRCA1-218ENST00000489037 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
BRCA1-218ENST00000489037 ANKIB1Q9P2G1 1089 aa18.06■□□□□ 0.48
BRCA1-218ENST00000489037 RTL9Q8NET4 1388 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 CASP7P55210 303 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 GPSM2P81274 684 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 WASHC4Q2M389 1173 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 GREM2Q9H772 168 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 SCN4AP35499 1836 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 SPEF2Q9C093 1822 aa18.05■□□□□ 0.48
BRCA1-218ENST00000489037 ZNF541Q9H0D2 1346 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 KIAA2012Q0VF49 1180 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 GPC2Q8N158 579 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 ZNRF3Q9ULT6 936 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 GJA3Q9Y6H8 435 aa18.04■□□□□ 0.48
BRCA1-218ENST00000489037 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 G3V3G9 751 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 CSF1RP07333 972 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 ITGA6P23229 1130 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 BSDC1Q9NW68 430 aaPredicted RBP18.03■□□□□ 0.48
BRCA1-218ENST00000489037 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
BRCA1-218ENST00000489037 FSTL1Q12841 308 aa18.02■□□□□ 0.48
BRCA1-218ENST00000489037 IFIT5Q13325 482 aaKnown RBP18.02■□□□□ 0.48
BRCA1-218ENST00000489037 SMC1BQ8NDV3 1235 aa18.02■□□□□ 0.48
BRCA1-218ENST00000489037 L3MBTL3Q96JM7 780 aaPredicted RBP18.02■□□□□ 0.48
BRCA1-218ENST00000489037 API5Q9BZZ5 524 aaKnown RBP18.02■□□□□ 0.48
BRCA1-218ENST00000489037 ZC3H12CQ9C0D7 883 aaKnown RBP18.02■□□□□ 0.48
BRCA1-218ENST00000489037 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
BRCA1-218ENST00000489037 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
BRCA1-218ENST00000489037 XDHP47989 1333 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 UFL1O94874 794 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 ATP2B4P23634 1241 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 LMOD1P29536 600 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms