RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SP8Q8IXZ3 490 aa20.71■□□□□ 0.91
ERGIC3-217ENST00000488935 MPNDQ8N594 471 aa20.71■□□□□ 0.91
ERGIC3-217ENST00000488935 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
ERGIC3-217ENST00000488935 SHTN1A0MZ66 631 aa20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 BBOX1O75936 387 aa20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 GRAPQ13588 217 aa20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 PLBD2Q8NHP8 589 aa20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 ABT1Q9ULW3 272 aaKnown RBP20.7■□□□□ 0.9
ERGIC3-217ENST00000488935 GMPSP49915 693 aaPredicted RBP20.69■□□□□ 0.9
ERGIC3-217ENST00000488935 GRM1Q13255 1194 aa20.69■□□□□ 0.9
ERGIC3-217ENST00000488935 CELF1Q92879 486 aaKnown RBP20.69■□□□□ 0.9
ERGIC3-217ENST00000488935 CFAP44Q96MT7 982 aa20.69■□□□□ 0.9
ERGIC3-217ENST00000488935 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
ERGIC3-217ENST00000488935 DEFB115Q30KQ5 88 aa20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 GRIPAP1Q4V328 841 aa20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 RTFDC1Q9BY42 306 aaPredicted RBP20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
ERGIC3-217ENST00000488935 YDJCA8MPS7 323 aa20.67■□□□□ 0.9
ERGIC3-217ENST00000488935 RIMBP2O15034 1052 aa20.67■□□□□ 0.9
ERGIC3-217ENST00000488935 CCDC184Q52MB2 194 aa20.67■□□□□ 0.9
ERGIC3-217ENST00000488935 GPRC5DQ9NZD1 345 aa20.67■□□□□ 0.9
ERGIC3-217ENST00000488935 DLK2Q6UY11 383 aa20.66■□□□□ 0.9
ERGIC3-217ENST00000488935 PAXIP1Q6ZW49 1069 aaPredicted RBP20.66■□□□□ 0.9
ERGIC3-217ENST00000488935 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 KIAA2012Q0VF49 1180 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 CST9Q5W186 159 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 C8orf58Q8NAV2 365 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 ZBTB12Q9Y330 459 aaPredicted RBP20.65■□□□□ 0.9
ERGIC3-217ENST00000488935 DUOX1Q9NRD9 1551 aa20.64■□□□□ 0.9
ERGIC3-217ENST00000488935 RASSF10A6NK89 507 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 HIRAP54198 1017 aaPredicted RBP20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 USP50Q70EL3 339 aaPredicted RBP20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 RIC3Q7Z5B4 369 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 MYD88Q99836 296 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 GLIS2Q9BZE0 524 aaPredicted RBP20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 DBNDD1Q9H9R9 158 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 KCNQ5Q9NR82 932 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 NSFL1CQ9UNZ2 370 aaKnown RBP20.64■□□□□ 0.89
ERGIC3-217ENST00000488935 TRPM7Q96QT4 1865 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 IRS4O14654 1257 aaPredicted RBP20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 HOXB7P09629 217 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 GPSM2P81274 684 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 DOK7Q18PE1 504 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 SEC31BQ9NQW1 1179 aa20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
ERGIC3-217ENST00000488935 LBX1P52954 281 aa20.62■□□□□ 0.89
ERGIC3-217ENST00000488935 WBP1LQ9NX94 342 aa20.62■□□□□ 0.89
ERGIC3-217ENST00000488935 POLLQ9UGP5 575 aa20.62■□□□□ 0.89
ERGIC3-217ENST00000488935 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
ERGIC3-217ENST00000488935 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
ERGIC3-217ENST00000488935 TSPYL6Q8N831 410 aa20.61■□□□□ 0.89
ERGIC3-217ENST00000488935 AIDAQ96BJ3 306 aa20.61■□□□□ 0.89
ERGIC3-217ENST00000488935 ZNF408Q9H9D4 720 aa20.61■□□□□ 0.89
ERGIC3-217ENST00000488935 VPS33BQ9H267 617 aa20.6■□□□□ 0.89
ERGIC3-217ENST00000488935 IFT57Q9NWB7 429 aa20.6■□□□□ 0.89
ERGIC3-217ENST00000488935 CNOT7Q9UIV1 285 aaKnown RBP20.6■□□□□ 0.89
ERGIC3-217ENST00000488935 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 LRRC37AA6NMS7 1700 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 PSMD14O00487 310 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 AOC2O75106 756 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 GNAI1P63096 354 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 GOLGA2Q08379 1002 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 WASHC4Q2M389 1173 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 TSR2Q969E8 191 aaKnown RBP20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 CAPNS2Q96L46 248 aa20.59■□□□□ 0.89
ERGIC3-217ENST00000488935 CELF2O95319 508 aaKnown RBP20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 EGFRP00533 1210 aa20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 TNIP1Q15025 636 aa20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 MICALL2Q8IY33 904 aa20.58■□□□□ 0.89
ERGIC3-217ENST00000488935 RPS8P62241 208 aaKnown RBP20.57■□□□□ 0.88
ERGIC3-217ENST00000488935 TSKSQ9UJT2 592 aa20.57■□□□□ 0.88
ERGIC3-217ENST00000488935 HSPA8P11142 646 aaKnown RBP20.56■□□□□ 0.88
ERGIC3-217ENST00000488935 TRIM28Q13263 835 aaKnown RBP20.56■□□□□ 0.88
ERGIC3-217ENST00000488935 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
ERGIC3-217ENST00000488935 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
ERGIC3-217ENST00000488935 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
ERGIC3-217ENST00000488935 WTIPA6NIX2 430 aaPredicted RBP20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 ECE2O60344 883 aa20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 TLL2Q9Y6L7 1015 aa20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 SCN9AQ15858 1988 aa20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 RTL9Q8NET4 1388 aa20.55■□□□□ 0.88
ERGIC3-217ENST00000488935 H7C1D1 291 aa20.54■□□□□ 0.88
ERGIC3-217ENST00000488935 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
ERGIC3-217ENST00000488935 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms