RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 RTFDC1Q9BY42 306 aaPredicted RBP23.42■■□□□ 1.34
MMP11-210ENST00000488363 SF3B3Q15393 1217 aaKnown RBP23.41■■□□□ 1.34
MMP11-210ENST00000488363 TMC4Q7Z404 712 aa23.41■■□□□ 1.34
MMP11-210ENST00000488363 PNMA8AQ86V59 439 aaPredicted RBP23.41■■□□□ 1.34
MMP11-210ENST00000488363 MPNDQ8N594 471 aa23.41■■□□□ 1.34
MMP11-210ENST00000488363 TSPYL6Q8N831 410 aa23.41■■□□□ 1.34
MMP11-210ENST00000488363 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
MMP11-210ENST00000488363 DDX60Q8IY21 1712 aaKnown RBP23.41■■□□□ 1.34
MMP11-210ENST00000488363 IRS4O14654 1257 aaPredicted RBP23.4■■□□□ 1.34
MMP11-210ENST00000488363 MYD88Q99836 296 aa23.4■■□□□ 1.34
MMP11-210ENST00000488363 CLEC11AQ9Y240 323 aa23.4■■□□□ 1.34
MMP11-210ENST00000488363 DDX58O95786 925 aaKnown RBP23.39■■□□□ 1.33
MMP11-210ENST00000488363 LMOD1P29536 600 aaPredicted RBP23.38■■□□□ 1.33
MMP11-210ENST00000488363 ZBTB38Q8NAP3 1195 aaPredicted RBP23.38■■□□□ 1.33
MMP11-210ENST00000488363 CREBZFQ9NS37 354 aa23.38■■□□□ 1.33
MMP11-210ENST00000488363 TAF1P21675 1872 aa23.37■■□□□ 1.33
MMP11-210ENST00000488363 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
MMP11-210ENST00000488363 CCDC191Q8NCU4 936 aa23.37■■□□□ 1.33
MMP11-210ENST00000488363 CELF1Q92879 486 aaKnown RBP23.37■■□□□ 1.33
MMP11-210ENST00000488363 ZNRF3Q9ULT6 936 aa23.37■■□□□ 1.33
MMP11-210ENST00000488363 IL16Q14005 1332 aa23.36■■□□□ 1.33
MMP11-210ENST00000488363 PASKQ96RG2 1323 aa23.36■■□□□ 1.33
MMP11-210ENST00000488363 HSP90B1P14625 803 aaKnown RBP23.36■■□□□ 1.33
MMP11-210ENST00000488363 SCNN1DP51172 638 aa23.36■■□□□ 1.33
MMP11-210ENST00000488363 KIAA2012Q0VF49 1180 aa23.36■■□□□ 1.33
MMP11-210ENST00000488363 METTL22Q9BUU2 404 aaPredicted RBP23.36■■□□□ 1.33
MMP11-210ENST00000488363 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
MMP11-210ENST00000488363 CWC25Q9NXE8 425 aaPredicted RBP23.35■■□□□ 1.33
MMP11-210ENST00000488363 PCNTO95613 3336 aa23.35■■□□□ 1.33
MMP11-210ENST00000488363 ADAMTSL1Q8N6G6 1762 aa23.35■■□□□ 1.33
MMP11-210ENST00000488363 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
MMP11-210ENST00000488363 EPS15P42566 896 aa23.34■■□□□ 1.33
MMP11-210ENST00000488363 TWISTNBQ3B726 338 aaPredicted RBP23.34■■□□□ 1.33
MMP11-210ENST00000488363 MAP3K2Q9Y2U5 619 aa23.34■■□□□ 1.33
MMP11-210ENST00000488363 PCCAP05165 728 aaPredicted RBP23.33■■□□□ 1.33
MMP11-210ENST00000488363 CXCL9Q07325 125 aa23.33■■□□□ 1.33
MMP11-210ENST00000488363 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
MMP11-210ENST00000488363 LRRC37AA6NMS7 1700 aa23.33■■□□□ 1.32
MMP11-210ENST00000488363 LTBP1Q14766 1721 aa23.33■■□□□ 1.32
MMP11-210ENST00000488363 KSR2Q6VAB6 950 aa23.32■■□□□ 1.32
MMP11-210ENST00000488363 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
MMP11-210ENST00000488363 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
MMP11-210ENST00000488363 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
MMP11-210ENST00000488363 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
MMP11-210ENST00000488363 PI4KAP2A4QPH2 592 aa23.31■■□□□ 1.32
MMP11-210ENST00000488363 RPS8P62241 208 aaKnown RBP23.31■■□□□ 1.32
MMP11-210ENST00000488363 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
MMP11-210ENST00000488363 PI4KAP1Q8N8J0 262 aa23.31■■□□□ 1.32
MMP11-210ENST00000488363 JARID2Q92833 1246 aaPredicted RBP23.31■■□□□ 1.32
MMP11-210ENST00000488363 PDE8AO60658 829 aa23.3■■□□□ 1.32
MMP11-210ENST00000488363 CCDC152Q4G0S7 254 aa23.3■■□□□ 1.32
MMP11-210ENST00000488363 IFFO2Q5TF58 517 aa23.3■■□□□ 1.32
MMP11-210ENST00000488363 USP50Q70EL3 339 aaPredicted RBP23.3■■□□□ 1.32
MMP11-210ENST00000488363 GPRC5DQ9NZD1 345 aa23.3■■□□□ 1.32
MMP11-210ENST00000488363 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
MMP11-210ENST00000488363 COL4A1P02462 1669 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 TMEM88BA6NKF7 163 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 RAD17O75943 681 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 GPSM2P81274 684 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 TNIP1Q15025 636 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 FANCIQ9NVI1 1328 aa23.29■■□□□ 1.32
MMP11-210ENST00000488363 C6orf229H3BNL8 230 aa23.28■■□□□ 1.32
MMP11-210ENST00000488363 SLC4A2P04920 1241 aa23.28■■□□□ 1.32
MMP11-210ENST00000488363 IGKV5-2P06315 115 aa23.28■■□□□ 1.32
MMP11-210ENST00000488363 GMPSP49915 693 aaPredicted RBP23.28■■□□□ 1.32
MMP11-210ENST00000488363 NEXNQ0ZGT2 675 aa23.28■■□□□ 1.32
MMP11-210ENST00000488363 G2E3Q7L622 706 aa23.28■■□□□ 1.32
MMP11-210ENST00000488363 ADARB2Q9NS39 739 aaKnown RBP23.28■■□□□ 1.32
MMP11-210ENST00000488363 BCL2L13Q9BXK5 485 aa23.27■■□□□ 1.32
MMP11-210ENST00000488363 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
MMP11-210ENST00000488363 CDHR2Q9BYE9 1310 aa23.27■■□□□ 1.32
MMP11-210ENST00000488363 YDJCA8MPS7 323 aa23.26■■□□□ 1.31
MMP11-210ENST00000488363 CCDC85AQ96PX6 553 aaPredicted RBP23.26■■□□□ 1.31
MMP11-210ENST00000488363 EYA3Q99504 573 aa23.26■■□□□ 1.31
MMP11-210ENST00000488363 CNTNAP1P78357 1384 aa23.26■■□□□ 1.31
MMP11-210ENST00000488363 RIMBP2O15034 1052 aa23.25■■□□□ 1.31
MMP11-210ENST00000488363 FAM9BQ8IZU0 186 aa23.25■■□□□ 1.31
MMP11-210ENST00000488363 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
MMP11-210ENST00000488363 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
MMP11-210ENST00000488363 FLIIQ13045 1269 aa23.24■■□□□ 1.31
MMP11-210ENST00000488363 TBC1D16Q8TBP0 767 aa23.24■■□□□ 1.31
MMP11-210ENST00000488363 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
MMP11-210ENST00000488363 NEURL1BA8MQ27 555 aa23.23■■□□□ 1.31
MMP11-210ENST00000488363 CTSWP56202 376 aa23.23■■□□□ 1.31
MMP11-210ENST00000488363 CWF19L2Q2TBE0 894 aaKnown RBP23.23■■□□□ 1.31
MMP11-210ENST00000488363 PODXL2Q9NZ53 605 aa23.23■■□□□ 1.31
MMP11-210ENST00000488363 VAMP4O75379 141 aa23.22■■□□□ 1.31
MMP11-210ENST00000488363 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
MMP11-210ENST00000488363 ANKRD18AQ8IVF6 992 aa23.22■■□□□ 1.31
MMP11-210ENST00000488363 GPR101Q96P66 508 aaPredicted RBP23.22■■□□□ 1.31
MMP11-210ENST00000488363 ANKIB1Q9P2G1 1089 aa23.22■■□□□ 1.31
MMP11-210ENST00000488363 ECE2O60344 883 aa23.21■■□□□ 1.31
MMP11-210ENST00000488363 FKBP5Q13451 457 aaPredicted RBP23.21■■□□□ 1.31
MMP11-210ENST00000488363 DOK7Q18PE1 504 aa23.21■■□□□ 1.31
MMP11-210ENST00000488363 ZC3H12CQ9C0D7 883 aaKnown RBP23.21■■□□□ 1.31
MMP11-210ENST00000488363 CNOT7Q9UIV1 285 aaKnown RBP23.21■■□□□ 1.31
MMP11-210ENST00000488363 GGA1Q9UJY5 639 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms