RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
ITSN1-230ENST00000488166 PAXIP1Q6ZW49 1069 aaPredicted RBP22.12■■□□□ 1.13
ITSN1-230ENST00000488166 PLBD2Q8NHP8 589 aa22.12■■□□□ 1.13
ITSN1-230ENST00000488166 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
ITSN1-230ENST00000488166 CXCL9Q07325 125 aa22.11■■□□□ 1.13
ITSN1-230ENST00000488166 ANKRD13DQ6ZTN6 518 aa22.11■■□□□ 1.13
ITSN1-230ENST00000488166 RTFDC1Q9BY42 306 aaPredicted RBP22.11■■□□□ 1.13
ITSN1-230ENST00000488166 ADARB2Q9NS39 739 aaKnown RBP22.11■■□□□ 1.13
ITSN1-230ENST00000488166 GPRC5DQ9NZD1 345 aa22.11■■□□□ 1.13
ITSN1-230ENST00000488166 LRRC37AA6NMS7 1700 aa22.1■■□□□ 1.13
ITSN1-230ENST00000488166 CTCFP49711 727 aaPredicted RBP22.1■■□□□ 1.13
ITSN1-230ENST00000488166 FMR1Q06787 632 aaKnown RBP eCLIP22.1■■□□□ 1.13
ITSN1-230ENST00000488166 BCL2L13Q9BXK5 485 aa22.1■■□□□ 1.13
ITSN1-230ENST00000488166 WDR33Q9C0J8 1336 aaKnown RBP22.09■■□□□ 1.13
ITSN1-230ENST00000488166 ATP5J2-PTCD1G3V325 749 aa22.09■■□□□ 1.13
ITSN1-230ENST00000488166 HOXB7P09629 217 aa22.09■■□□□ 1.13
ITSN1-230ENST00000488166 CIAPIN1Q6FI81 312 aa22.09■■□□□ 1.13
ITSN1-230ENST00000488166 FAM89AQ96GI7 184 aa22.09■■□□□ 1.13
ITSN1-230ENST00000488166 RAD17O75943 681 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 GMPSP49915 693 aaPredicted RBP22.08■■□□□ 1.13
ITSN1-230ENST00000488166 KIAA2012Q0VF49 1180 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 GRM1Q13255 1194 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 TNIP1Q15025 636 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 DUSP27Q5VZP5 1158 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 TMC4Q7Z404 712 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 CFAP44Q96MT7 982 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
ITSN1-230ENST00000488166 TRAF5O00463 557 aa22.07■■□□□ 1.12
ITSN1-230ENST00000488166 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
ITSN1-230ENST00000488166 PRDM10Q9NQV6 1147 aa22.07■■□□□ 1.12
ITSN1-230ENST00000488166 WBP1LQ9NX94 342 aa22.07■■□□□ 1.12
ITSN1-230ENST00000488166 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
ITSN1-230ENST00000488166 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
ITSN1-230ENST00000488166 DUOX1Q9NRD9 1551 aa22.05■■□□□ 1.12
ITSN1-230ENST00000488166 LBX1P52954 281 aa22.05■■□□□ 1.12
ITSN1-230ENST00000488166 MAP2K1Q02750 393 aaPredicted RBP22.05■■□□□ 1.12
ITSN1-230ENST00000488166 ECE1P42892 770 aa22.04■■□□□ 1.12
ITSN1-230ENST00000488166 RIC3Q7Z5B4 369 aa22.04■■□□□ 1.12
ITSN1-230ENST00000488166 CAPNS2Q96L46 248 aa22.04■■□□□ 1.12
ITSN1-230ENST00000488166 NSFL1CQ9UNZ2 370 aaKnown RBP22.04■■□□□ 1.12
ITSN1-230ENST00000488166 CDHR2Q9BYE9 1310 aa22.04■■□□□ 1.12
ITSN1-230ENST00000488166 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
ITSN1-230ENST00000488166 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
ITSN1-230ENST00000488166 WASHC4Q2M389 1173 aa22.03■■□□□ 1.12
ITSN1-230ENST00000488166 CST9Q5W186 159 aa22.03■■□□□ 1.12
ITSN1-230ENST00000488166 CYP4F22Q6NT55 531 aa22.03■■□□□ 1.12
ITSN1-230ENST00000488166 CELF1Q92879 486 aaKnown RBP22.03■■□□□ 1.12
ITSN1-230ENST00000488166 PRKRIP1Q9H875 184 aaPredicted RBP22.03■■□□□ 1.12
ITSN1-230ENST00000488166 ELL2O00472 640 aaPredicted RBP22.02■■□□□ 1.12
ITSN1-230ENST00000488166 IRS4O14654 1257 aaPredicted RBP22.02■■□□□ 1.12
ITSN1-230ENST00000488166 RIMBP2O15034 1052 aa22.02■■□□□ 1.12
ITSN1-230ENST00000488166 SF3B3Q15393 1217 aaKnown RBP22.02■■□□□ 1.12
ITSN1-230ENST00000488166 CNOT7Q9UIV1 285 aaKnown RBP22.02■■□□□ 1.12
ITSN1-230ENST00000488166 YDJCA8MPS7 323 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 H7C1D1 291 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 APAF1O14727 1248 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 CALD1Q05682 793 aaKnown RBP22.01■■□□□ 1.11
ITSN1-230ENST00000488166 BEGAINQ9BUH8 593 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 GLIS2Q9BZE0 524 aaPredicted RBP22.01■■□□□ 1.11
ITSN1-230ENST00000488166 ZNF408Q9H9D4 720 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 THSD7BQ9C0I4 1608 aa22.01■■□□□ 1.11
ITSN1-230ENST00000488166 POLR2AP24928 1970 aaKnown RBP22.01■■□□□ 1.11
ITSN1-230ENST00000488166 CELF2O95319 508 aaKnown RBP22■■□□□ 1.11
ITSN1-230ENST00000488166 GNAI1P63096 354 aa22■■□□□ 1.11
ITSN1-230ENST00000488166 GPR101Q96P66 508 aaPredicted RBP22■■□□□ 1.11
ITSN1-230ENST00000488166 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
ITSN1-230ENST00000488166 DBNDD1Q9H9R9 158 aa22■■□□□ 1.11
ITSN1-230ENST00000488166 TLL2Q9Y6L7 1015 aa22■■□□□ 1.11
ITSN1-230ENST00000488166 COL4A1P02462 1669 aa22■■□□□ 1.11
ITSN1-230ENST00000488166 HSPA8P11142 646 aaKnown RBP21.99■■□□□ 1.11
ITSN1-230ENST00000488166 EYA3Q99504 573 aa21.99■■□□□ 1.11
ITSN1-230ENST00000488166 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
ITSN1-230ENST00000488166 ZBTB12Q9Y330 459 aaPredicted RBP21.99■■□□□ 1.11
ITSN1-230ENST00000488166 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
ITSN1-230ENST00000488166 GPSM2P81274 684 aa21.98■■□□□ 1.11
ITSN1-230ENST00000488166 TRIM28Q13263 835 aaKnown RBP21.98■■□□□ 1.11
ITSN1-230ENST00000488166 MICALL2Q8IY33 904 aa21.98■■□□□ 1.11
ITSN1-230ENST00000488166 TRPM4Q8TD43 1214 aa21.98■■□□□ 1.11
ITSN1-230ENST00000488166 ZC3H15Q8WU90 426 aaKnown RBP21.98■■□□□ 1.11
ITSN1-230ENST00000488166 MYD88Q99836 296 aa21.98■■□□□ 1.11
ITSN1-230ENST00000488166 SHTN1A0MZ66 631 aa21.97■■□□□ 1.11
ITSN1-230ENST00000488166 PSMD14O00487 310 aa21.97■■□□□ 1.11
ITSN1-230ENST00000488166 HIRAP54198 1017 aaPredicted RBP21.97■■□□□ 1.11
ITSN1-230ENST00000488166 CDC37L1Q7L3B6 337 aa21.97■■□□□ 1.11
ITSN1-230ENST00000488166 ZBTB38Q8NAP3 1195 aaPredicted RBP21.97■■□□□ 1.11
ITSN1-230ENST00000488166 POLLQ9UGP5 575 aa21.97■■□□□ 1.11
ITSN1-230ENST00000488166 PGAP2Q9UHJ9 254 aa21.97■■□□□ 1.11
ITSN1-230ENST00000488166 G3V3G9 751 aa21.96■■□□□ 1.11
ITSN1-230ENST00000488166 HSP90B1P14625 803 aaKnown RBP21.96■■□□□ 1.11
ITSN1-230ENST00000488166 RPS8P62241 208 aaKnown RBP21.96■■□□□ 1.11
ITSN1-230ENST00000488166 DOK7Q18PE1 504 aa21.96■■□□□ 1.11
ITSN1-230ENST00000488166 DCAF8Q5TAQ9 597 aa21.96■■□□□ 1.11
ITSN1-230ENST00000488166 SPEF2Q9C093 1822 aa21.95■■□□□ 1.1
ITSN1-230ENST00000488166 ECE2O60344 883 aa21.95■■□□□ 1.1
ITSN1-230ENST00000488166 AOC2O75106 756 aa21.95■■□□□ 1.1
ITSN1-230ENST00000488166 SAPCD2Q86UD0 394 aa21.95■■□□□ 1.1
ITSN1-230ENST00000488166 MYH3P11055 1940 aa21.94■■□□□ 1.1
ITSN1-230ENST00000488166 DDX58O95786 925 aaKnown RBP21.94■■□□□ 1.1
ITSN1-230ENST00000488166 SAMD7Q7Z3H4 446 aa21.94■■□□□ 1.1
ITSN1-230ENST00000488166 DPF2Q92785 391 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms