RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 F6X3S4 739 aa21.74■■□□□ 1.07
HMG20B-212ENST00000487894 COL4A5P29400 1685 aa21.74■■□□□ 1.07
HMG20B-212ENST00000487894 WDR90Q96KV7 1748 aa21.74■■□□□ 1.07
HMG20B-212ENST00000487894 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
HMG20B-212ENST00000487894 LINS1Q8NG48 757 aa21.73■■□□□ 1.07
HMG20B-212ENST00000487894 PSMD1Q99460 953 aa21.73■■□□□ 1.07
HMG20B-212ENST00000487894 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
HMG20B-212ENST00000487894 PDE8AO60658 829 aa21.72■■□□□ 1.07
HMG20B-212ENST00000487894 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
HMG20B-212ENST00000487894 GCKRQ14397 625 aa21.72■■□□□ 1.07
HMG20B-212ENST00000487894 SSH1Q8WYL5 1049 aa21.72■■□□□ 1.07
HMG20B-212ENST00000487894 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
HMG20B-212ENST00000487894 BBOX1O75936 387 aa21.71■■□□□ 1.07
HMG20B-212ENST00000487894 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
HMG20B-212ENST00000487894 CELF1Q92879 486 aaKnown RBP21.71■■□□□ 1.07
HMG20B-212ENST00000487894 H7C1W4 665 aa21.7■■□□□ 1.06
HMG20B-212ENST00000487894 GRIPAP1Q4V328 841 aa21.7■■□□□ 1.06
HMG20B-212ENST00000487894 BEND3Q5T5X7 828 aa21.7■■□□□ 1.06
HMG20B-212ENST00000487894 UBE3BQ7Z3V4 1068 aa21.7■■□□□ 1.06
HMG20B-212ENST00000487894 KIF3CO14782 793 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 IARSP41252 1262 aaKnown RBP21.69■■□□□ 1.06
HMG20B-212ENST00000487894 CASP7P55210 303 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 ALDH1L2Q3SY69 923 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 PPP4R3CPQ6ZMV5 832 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 SP8Q8IXZ3 490 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 BCL2L13Q9BXK5 485 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 NMRK2Q9NPI5 230 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 A0A1B0GUL6 1792 aa21.69■■□□□ 1.06
HMG20B-212ENST00000487894 CT47B1P0C2W7 299 aaPredicted RBP21.68■■□□□ 1.06
HMG20B-212ENST00000487894 CTSWP56202 376 aa21.68■■□□□ 1.06
HMG20B-212ENST00000487894 CCDC152Q4G0S7 254 aa21.68■■□□□ 1.06
HMG20B-212ENST00000487894 TMC4Q7Z404 712 aa21.68■■□□□ 1.06
HMG20B-212ENST00000487894 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
HMG20B-212ENST00000487894 PTPRCP08575 1304 aa21.67■■□□□ 1.06
HMG20B-212ENST00000487894 GLTPD2A6NH11 291 aa21.67■■□□□ 1.06
HMG20B-212ENST00000487894 SCN4AP35499 1836 aa21.66■■□□□ 1.06
HMG20B-212ENST00000487894 RTL9Q8NET4 1388 aa21.66■■□□□ 1.06
HMG20B-212ENST00000487894 CCDC85AQ96PX6 553 aaPredicted RBP21.66■■□□□ 1.06
HMG20B-212ENST00000487894 TMX4Q9H1E5 349 aaPredicted RBP21.66■■□□□ 1.06
HMG20B-212ENST00000487894 TTLL11Q8NHH1 800 aa21.65■■□□□ 1.06
HMG20B-212ENST00000487894 PLA2G12BQ9BX93 195 aa21.65■■□□□ 1.06
HMG20B-212ENST00000487894 RTFDC1Q9BY42 306 aaPredicted RBP21.65■■□□□ 1.06
HMG20B-212ENST00000487894 SMC4Q9NTJ3 1288 aa21.65■■□□□ 1.06
HMG20B-212ENST00000487894 RPS8P62241 208 aaKnown RBP21.64■■□□□ 1.05
HMG20B-212ENST00000487894 SLC4A10Q6U841 1118 aa21.64■■□□□ 1.05
HMG20B-212ENST00000487894 DPP8Q6V1X1 898 aaPredicted RBP21.64■■□□□ 1.05
HMG20B-212ENST00000487894 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 ALDH1L1O75891 902 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 C1QTNF8P60827 252 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 MPNDQ8N594 471 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 SRCIN1Q9C0H9 1055 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 GREM2Q9H772 168 aa21.63■■□□□ 1.05
HMG20B-212ENST00000487894 ZBED9Q6R2W3 1325 aa21.62■■□□□ 1.05
HMG20B-212ENST00000487894 RRAGCQ9HB90 399 aa21.62■■□□□ 1.05
HMG20B-212ENST00000487894 FZD9O00144 591 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 GRM8O00222 908 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 AOC3Q16853 763 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 DPY19L2Q6NUT2 758 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 LARGE2Q8N3Y3 721 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 SUPT20HQ8NEM7 779 aa21.61■■□□□ 1.05
HMG20B-212ENST00000487894 PSME4Q14997 1843 aa21.6■■□□□ 1.05
HMG20B-212ENST00000487894 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
HMG20B-212ENST00000487894 DDNO94850 711 aaPredicted RBP21.6■■□□□ 1.05
HMG20B-212ENST00000487894 RARSP54136 660 aaKnown RBP21.6■■□□□ 1.05
HMG20B-212ENST00000487894 CEP350Q5VT06 3117 aa21.6■■□□□ 1.05
HMG20B-212ENST00000487894 POTECB2RU33 542 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 CSF1RP07333 972 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
HMG20B-212ENST00000487894 GPSM2P81274 684 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 FAM161AQ3B820 660 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 ANKRD18AQ8IVF6 992 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 JDP2Q8WYK2 163 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 CDC5LQ99459 802 aaKnown RBP21.59■■□□□ 1.05
HMG20B-212ENST00000487894 VPS33BQ9H267 617 aa21.59■■□□□ 1.05
HMG20B-212ENST00000487894 FOXO4P98177 505 aa21.58■■□□□ 1.05
HMG20B-212ENST00000487894 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.05
HMG20B-212ENST00000487894 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.05
HMG20B-212ENST00000487894 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
HMG20B-212ENST00000487894 SCN9AQ15858 1988 aa21.57■■□□□ 1.04
HMG20B-212ENST00000487894 UTYO14607 1347 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 VEGFAP15692 232 aaPredicted RBP21.56■■□□□ 1.04
HMG20B-212ENST00000487894 ITGA6P23229 1130 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 EPHA10Q5JZY3 1008 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 NIM1KQ8IY84 436 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 L3MBTL3Q96JM7 780 aaPredicted RBP21.56■■□□□ 1.04
HMG20B-212ENST00000487894 PODXL2Q9NZ53 605 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 NOB1Q9ULX3 412 aaKnown RBP21.56■■□□□ 1.04
HMG20B-212ENST00000487894 ADAMTSL1Q8N6G6 1762 aa21.56■■□□□ 1.04
HMG20B-212ENST00000487894 ZNF646O15015 1829 aaPredicted RBP21.55■■□□□ 1.04
HMG20B-212ENST00000487894 TOMM70O94826 608 aa21.55■■□□□ 1.04
HMG20B-212ENST00000487894 KIF16BQ96L93 1317 aa21.55■■□□□ 1.04
HMG20B-212ENST00000487894 NBPF7P0C2Y1 421 aaPredicted RBP21.54■■□□□ 1.04
HMG20B-212ENST00000487894 EIF6P56537 245 aaKnown RBP21.54■■□□□ 1.04
HMG20B-212ENST00000487894 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
HMG20B-212ENST00000487894 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
HMG20B-212ENST00000487894 SUCLG2Q96I99 432 aa21.54■■□□□ 1.04
HMG20B-212ENST00000487894 BSDC1Q9NW68 430 aaPredicted RBP21.54■■□□□ 1.04
HMG20B-212ENST00000487894 C6orf229H3BNL8 230 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms