RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 CCDC27Q2M243 656 aa30.43■■■□□ 2.46
PLOD3-215ENST00000487563 PNMA8AQ86V59 439 aaPredicted RBP30.43■■■□□ 2.46
PLOD3-215ENST00000487563 TSR2Q969E8 191 aaKnown RBP30.43■■■□□ 2.46
PLOD3-215ENST00000487563 VPS33BQ9H267 617 aa30.43■■■□□ 2.46
PLOD3-215ENST00000487563 DDX58O95786 925 aaKnown RBP30.42■■■□□ 2.46
PLOD3-215ENST00000487563 TMC4Q7Z404 712 aa30.42■■■□□ 2.46
PLOD3-215ENST00000487563 JMYQ8N9B5 988 aa30.42■■■□□ 2.46
PLOD3-215ENST00000487563 MYD88Q99836 296 aa30.42■■■□□ 2.46
PLOD3-215ENST00000487563 IRS4O14654 1257 aaPredicted RBP30.41■■■□□ 2.46
PLOD3-215ENST00000487563 WWC1Q8IX03 1113 aa30.41■■■□□ 2.46
PLOD3-215ENST00000487563 RTFDC1Q9BY42 306 aaPredicted RBP30.41■■■□□ 2.46
PLOD3-215ENST00000487563 SF3B3Q15393 1217 aaKnown RBP30.4■■■□□ 2.46
PLOD3-215ENST00000487563 TSPYL6Q8N831 410 aa30.4■■■□□ 2.46
PLOD3-215ENST00000487563 TAF1P21675 1872 aa30.39■■■□□ 2.46
PLOD3-215ENST00000487563 HSP90B1P14625 803 aaKnown RBP30.38■■■□□ 2.45
PLOD3-215ENST00000487563 ZBTB38Q8NAP3 1195 aaPredicted RBP30.38■■■□□ 2.45
PLOD3-215ENST00000487563 STK31Q9BXU1 1019 aa30.38■■■□□ 2.45
PLOD3-215ENST00000487563 CREBZFQ9NS37 354 aa30.38■■■□□ 2.45
PLOD3-215ENST00000487563 ZNRF3Q9ULT6 936 aa30.37■■■□□ 2.45
PLOD3-215ENST00000487563 CCDC191Q8NCU4 936 aa30.36■■■□□ 2.45
PLOD3-215ENST00000487563 ADAMTSL1Q8N6G6 1762 aa30.36■■■□□ 2.45
PLOD3-215ENST00000487563 SCNN1DP51172 638 aa30.35■■■□□ 2.45
PLOD3-215ENST00000487563 KIAA2012Q0VF49 1180 aa30.35■■■□□ 2.45
PLOD3-215ENST00000487563 CELF1Q92879 486 aaKnown RBP30.35■■■□□ 2.45
PLOD3-215ENST00000487563 CWC25Q9NXE8 425 aaPredicted RBP30.35■■■□□ 2.45
PLOD3-215ENST00000487563 IL16Q14005 1332 aa30.35■■■□□ 2.45
PLOD3-215ENST00000487563 LRRC37AA6NMS7 1700 aa30.35■■■□□ 2.45
PLOD3-215ENST00000487563 PASKQ96RG2 1323 aa30.34■■■□□ 2.45
PLOD3-215ENST00000487563 TWISTNBQ3B726 338 aaPredicted RBP30.34■■■□□ 2.45
PLOD3-215ENST00000487563 METTL22Q9BUU2 404 aaPredicted RBP30.34■■■□□ 2.45
PLOD3-215ENST00000487563 MAP1SQ66K74 1059 aaPredicted RBP30.33■■■□□ 2.45
PLOD3-215ENST00000487563 MAP3K2Q9Y2U5 619 aa30.33■■■□□ 2.45
PLOD3-215ENST00000487563 LTBP1Q14766 1721 aa30.33■■■□□ 2.45
PLOD3-215ENST00000487563 EPS15P42566 896 aa30.32■■■□□ 2.44
PLOD3-215ENST00000487563 NCBP3Q53F19 620 aaKnown RBP30.32■■■□□ 2.44
PLOD3-215ENST00000487563 NSFL1CQ9UNZ2 370 aaKnown RBP30.32■■■□□ 2.44
PLOD3-215ENST00000487563 SALL2Q9Y467 1007 aaPredicted RBP30.32■■■□□ 2.44
PLOD3-215ENST00000487563 ITGBL1O95965 494 aaPredicted RBP30.31■■■□□ 2.44
PLOD3-215ENST00000487563 PCCAP05165 728 aaPredicted RBP30.31■■■□□ 2.44
PLOD3-215ENST00000487563 CXCL9Q07325 125 aa30.31■■■□□ 2.44
PLOD3-215ENST00000487563 CNTROBQ8N137 903 aa30.31■■■□□ 2.44
PLOD3-215ENST00000487563 MKRN1Q9UHC7 482 aaKnown RBP30.31■■■□□ 2.44
PLOD3-215ENST00000487563 DUOX1Q9NRD9 1551 aa30.31■■■□□ 2.44
PLOD3-215ENST00000487563 CIAPIN1Q6FI81 312 aa30.3■■■□□ 2.44
PLOD3-215ENST00000487563 KSR2Q6VAB6 950 aa30.3■■■□□ 2.44
PLOD3-215ENST00000487563 RPS8P62241 208 aaKnown RBP30.29■■■□□ 2.44
PLOD3-215ENST00000487563 NEXNQ0ZGT2 675 aa30.29■■■□□ 2.44
PLOD3-215ENST00000487563 CCDC152Q4G0S7 254 aa30.29■■■□□ 2.44
PLOD3-215ENST00000487563 PI4KAP2A4QPH2 592 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 TMEM88BA6NKF7 163 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 C6orf229H3BNL8 230 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 PDE8AO60658 829 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 TNIP1Q15025 636 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 IFFO2Q5TF58 517 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 USP50Q70EL3 339 aaPredicted RBP30.28■■■□□ 2.44
PLOD3-215ENST00000487563 PI4KAP1Q8N8J0 262 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 JARID2Q92833 1246 aaPredicted RBP30.28■■■□□ 2.44
PLOD3-215ENST00000487563 GPRC5DQ9NZD1 345 aa30.28■■■□□ 2.44
PLOD3-215ENST00000487563 RAD17O75943 681 aa30.27■■■□□ 2.44
PLOD3-215ENST00000487563 GMPSP49915 693 aaPredicted RBP30.27■■■□□ 2.44
PLOD3-215ENST00000487563 WASHC4Q2M389 1173 aa30.27■■■□□ 2.44
PLOD3-215ENST00000487563 BCL2L13Q9BXK5 485 aa30.27■■■□□ 2.44
PLOD3-215ENST00000487563 COL4A1P02462 1669 aa30.27■■■□□ 2.44
PLOD3-215ENST00000487563 FANCIQ9NVI1 1328 aa30.26■■■□□ 2.44
PLOD3-215ENST00000487563 GPSM2P81274 684 aa30.26■■■□□ 2.43
PLOD3-215ENST00000487563 ADARB2Q9NS39 739 aaKnown RBP30.26■■■□□ 2.43
PLOD3-215ENST00000487563 SLC4A2P04920 1241 aa30.25■■■□□ 2.43
PLOD3-215ENST00000487563 EYA3Q99504 573 aa30.25■■■□□ 2.43
PLOD3-215ENST00000487563 SEC31BQ9NQW1 1179 aa30.25■■■□□ 2.43
PLOD3-215ENST00000487563 RIMBP2O15034 1052 aa30.24■■■□□ 2.43
PLOD3-215ENST00000487563 WDR63Q8IWG1 891 aa30.24■■■□□ 2.43
PLOD3-215ENST00000487563 CCDC85AQ96PX6 553 aaPredicted RBP30.24■■■□□ 2.43
PLOD3-215ENST00000487563 CNTNAP1P78357 1384 aa30.24■■■□□ 2.43
PLOD3-215ENST00000487563 CDHR2Q9BYE9 1310 aa30.23■■■□□ 2.43
PLOD3-215ENST00000487563 HSPA1AP0DMV8 641 aaKnown RBP30.23■■■□□ 2.43
PLOD3-215ENST00000487563 HSPA1BP0DMV9 641 aaKnown RBP30.23■■■□□ 2.43
PLOD3-215ENST00000487563 FAM9BQ8IZU0 186 aa30.23■■■□□ 2.43
PLOD3-215ENST00000487563 IGKV5-2P06315 115 aa30.22■■■□□ 2.43
PLOD3-215ENST00000487563 G2E3Q7L622 706 aa30.22■■■□□ 2.43
PLOD3-215ENST00000487563 DBNDD1Q9H9R9 158 aa30.22■■■□□ 2.43
PLOD3-215ENST00000487563 POLLQ9UGP5 575 aa30.22■■■□□ 2.43
PLOD3-215ENST00000487563 YDJCA8MPS7 323 aa30.21■■■□□ 2.43
PLOD3-215ENST00000487563 ANKIB1Q9P2G1 1089 aa30.21■■■□□ 2.43
PLOD3-215ENST00000487563 CWF19L2Q2TBE0 894 aaKnown RBP30.2■■■□□ 2.43
PLOD3-215ENST00000487563 TBC1D16Q8TBP0 767 aa30.2■■■□□ 2.43
PLOD3-215ENST00000487563 CTSWP56202 376 aa30.19■■■□□ 2.42
PLOD3-215ENST00000487563 FLIIQ13045 1269 aa30.19■■■□□ 2.42
PLOD3-215ENST00000487563 ANKRD18AQ8IVF6 992 aa30.19■■■□□ 2.42
PLOD3-215ENST00000487563 NEURL1BA8MQ27 555 aa30.18■■■□□ 2.42
PLOD3-215ENST00000487563 UFL1O94874 794 aa30.18■■■□□ 2.42
PLOD3-215ENST00000487563 FKBP5Q13451 457 aaPredicted RBP30.18■■■□□ 2.42
PLOD3-215ENST00000487563 GPR101Q96P66 508 aaPredicted RBP30.18■■■□□ 2.42
PLOD3-215ENST00000487563 ABT1Q9ULW3 272 aaKnown RBP30.18■■■□□ 2.42
PLOD3-215ENST00000487563 G3V3G9 751 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 ECE2O60344 883 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 EXOSC9Q06265 439 aaKnown RBP30.17■■■□□ 2.42
PLOD3-215ENST00000487563 DOK7Q18PE1 504 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 DCAF8Q5TAQ9 597 aa30.17■■■□□ 2.42
PLOD3-215ENST00000487563 CDC5LQ99459 802 aaKnown RBP30.17■■■□□ 2.42
PLOD3-215ENST00000487563 ZC3H12CQ9C0D7 883 aaKnown RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms