RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 PDE1AP54750 535 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 G3BP1Q13283 466 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 AK7Q96M32 723 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 LRRC4BQ9NT99 713 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 NARFQ9UHQ1 456 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 TUBGCP6Q96RT7 1819 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 LAMB2P55268 1798 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 C4AP0C0L4 1744 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 COL24A1Q17RW2 1714 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 GNPATO15228 680 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 SUSD4Q5VX71 490 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 FAM89AQ96GI7 184 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 BCL2L12Q9HB09 334 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 IL1RAPL2Q9NP60 686 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 STK32BQ9NY57 414 aa10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 TRMT112Q9UI30 125 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-209ENST00000487118 IRS4O14654 1257 aaPredicted RBP10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 PDE8AO60658 829 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 NTSR2O95665 410 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 ADRA2BP18089 450 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 MX1P20591 662 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
NUDCD3-209ENST00000487118 UBR3Q6ZT12 1888 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 CIAO1O76071 339 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 CTSWP56202 376 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 AMIGO3Q86WK7 504 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 CLASRPQ8N2M8 674 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 TTLL11Q8NHH1 800 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 NIP7Q9Y221 180 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 DDX60Q8IY21 1712 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
NUDCD3-209ENST00000487118 MYH3P11055 1940 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 EYA2O00167 538 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 ATG9AQ7Z3C6 839 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 SIL1Q9H173 461 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-209ENST00000487118 ZPR1O75312 459 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 CDC45O75419 566 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 SEC24BO95487 1268 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 SDSP20132 328 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 SSFA2P28290 1259 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 ZNF827Q17R98 1081 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 CCDC57Q2TAC2 916 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 TBC1D9BQ66K14 1250 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 SMIM5Q71RC9 77 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 MTFR1LQ9H019 292 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-209ENST00000487118 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 TFCP2Q12800 502 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 SLC10A5Q5PT55 438 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 AACSQ86V21 672 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 GREM2Q9H772 168 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 ECHDC1Q9NTX5 307 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
NUDCD3-209ENST00000487118 ZNF609O15014 1411 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 ANKRD18BA2A2Z9 1011 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 ITGA6P23229 1130 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 RFC4P35249 363 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 NLGN2Q8NFZ4 835 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 GPATCH3Q96I76 525 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 NYXQ9GZU5 481 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 BCL11AQ9H165 835 aa10.53□□□□□ -0.72
NUDCD3-209ENST00000487118 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 ERC2O15083 957 aa10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 SF3B3Q15393 1217 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 PUS3Q9BZE2 481 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 RIPOR2Q9Y4F9 1068 aa10.52□□□□□ -0.73
NUDCD3-209ENST00000487118 ABCC12Q96J65 1359 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms