RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 HSP90B1P14625 803 aaKnown RBP24.57■■□□□ 1.52
CLIP2-206ENST00000487091 METTL22Q9BUU2 404 aaPredicted RBP24.57■■□□□ 1.52
CLIP2-206ENST00000487091 STK31Q9BXU1 1019 aa24.57■■□□□ 1.52
CLIP2-206ENST00000487091 TAF1P21675 1872 aa24.56■■□□□ 1.52
CLIP2-206ENST00000487091 PPIP5K2O43314 1243 aa24.56■■□□□ 1.52
CLIP2-206ENST00000487091 DPP8Q6V1X1 898 aaPredicted RBP24.56■■□□□ 1.52
CLIP2-206ENST00000487091 MPNDQ8N594 471 aa24.56■■□□□ 1.52
CLIP2-206ENST00000487091 HACL1Q9UJ83 578 aa24.56■■□□□ 1.52
CLIP2-206ENST00000487091 HTRA3P83110 453 aa24.55■■□□□ 1.52
CLIP2-206ENST00000487091 RTL5Q5HYW3 569 aaPredicted RBP24.55■■□□□ 1.52
CLIP2-206ENST00000487091 KSR2Q6VAB6 950 aa24.55■■□□□ 1.52
CLIP2-206ENST00000487091 LDHDQ86WU2 507 aa24.55■■□□□ 1.52
CLIP2-206ENST00000487091 NIM1KQ8IY84 436 aa24.55■■□□□ 1.52
CLIP2-206ENST00000487091 PCCAP05165 728 aaPredicted RBP24.54■■□□□ 1.52
CLIP2-206ENST00000487091 POTEIP0CG38 1075 aa24.54■■□□□ 1.52
CLIP2-206ENST00000487091 POTEJP0CG39 1038 aa24.54■■□□□ 1.52
CLIP2-206ENST00000487091 CWC25Q9NXE8 425 aaPredicted RBP24.54■■□□□ 1.52
CLIP2-206ENST00000487091 AOC3Q16853 763 aa24.53■■□□□ 1.52
CLIP2-206ENST00000487091 KLRG1Q96E93 195 aa24.53■■□□□ 1.52
CLIP2-206ENST00000487091 MAP3K2Q9Y2U5 619 aa24.53■■□□□ 1.52
CLIP2-206ENST00000487091 FANCIQ9NVI1 1328 aa24.53■■□□□ 1.52
CLIP2-206ENST00000487091 PI4KAP2A4QPH2 592 aa24.52■■□□□ 1.52
CLIP2-206ENST00000487091 EPHX2P34913 555 aa24.52■■□□□ 1.52
CLIP2-206ENST00000487091 PNMA8AQ86V59 439 aaPredicted RBP24.52■■□□□ 1.52
CLIP2-206ENST00000487091 PI4KAP1Q8N8J0 262 aa24.52■■□□□ 1.52
CLIP2-206ENST00000487091 CELF1Q92879 486 aaKnown RBP24.52■■□□□ 1.52
CLIP2-206ENST00000487091 SALL2Q9Y467 1007 aaPredicted RBP24.52■■□□□ 1.52
CLIP2-206ENST00000487091 GJA3Q9Y6H8 435 aa24.52■■□□□ 1.52
CLIP2-206ENST00000487091 KIAA2012Q0VF49 1180 aa24.51■■□□□ 1.51
CLIP2-206ENST00000487091 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
CLIP2-206ENST00000487091 LRRC37AA6NMS7 1700 aa24.5■■□□□ 1.51
CLIP2-206ENST00000487091 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
CLIP2-206ENST00000487091 ZNRF3Q9ULT6 936 aa24.5■■□□□ 1.51
CLIP2-206ENST00000487091 CACNA1FO60840 1977 aa24.5■■□□□ 1.51
CLIP2-206ENST00000487091 PDE8AO60658 829 aa24.49■■□□□ 1.51
CLIP2-206ENST00000487091 RPS8P62241 208 aaKnown RBP24.49■■□□□ 1.51
CLIP2-206ENST00000487091 NEXNQ0ZGT2 675 aa24.49■■□□□ 1.51
CLIP2-206ENST00000487091 EAPPQ56P03 285 aaPredicted RBP24.49■■□□□ 1.51
CLIP2-206ENST00000487091 VAMP4O75379 141 aa24.48■■□□□ 1.51
CLIP2-206ENST00000487091 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
CLIP2-206ENST00000487091 LMOD1P29536 600 aaPredicted RBP24.48■■□□□ 1.51
CLIP2-206ENST00000487091 G2E3Q7L622 706 aa24.48■■□□□ 1.51
CLIP2-206ENST00000487091 CDHR2Q9BYE9 1310 aa24.47■■□□□ 1.51
CLIP2-206ENST00000487091 SCNN1DP51172 638 aa24.47■■□□□ 1.51
CLIP2-206ENST00000487091 CCDC152Q4G0S7 254 aa24.47■■□□□ 1.51
CLIP2-206ENST00000487091 JMYQ8N9B5 988 aa24.47■■□□□ 1.51
CLIP2-206ENST00000487091 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
CLIP2-206ENST00000487091 CXCL9Q07325 125 aa24.46■■□□□ 1.51
CLIP2-206ENST00000487091 NSFL1CQ9UNZ2 370 aaKnown RBP24.46■■□□□ 1.51
CLIP2-206ENST00000487091 CLEC11AQ9Y240 323 aa24.46■■□□□ 1.51
CLIP2-206ENST00000487091 DUOX1Q9NRD9 1551 aa24.46■■□□□ 1.51
CLIP2-206ENST00000487091 PASKQ96RG2 1323 aa24.45■■□□□ 1.5
CLIP2-206ENST00000487091 EXOSC9Q06265 439 aaKnown RBP24.45■■□□□ 1.5
CLIP2-206ENST00000487091 FLIIQ13045 1269 aa24.45■■□□□ 1.5
CLIP2-206ENST00000487091 JARID2Q92833 1246 aaPredicted RBP24.45■■□□□ 1.5
CLIP2-206ENST00000487091 ITGBL1O95965 494 aaPredicted RBP24.44■■□□□ 1.5
CLIP2-206ENST00000487091 SPINK5Q9NQ38 1064 aaPredicted RBP24.44■■□□□ 1.5
CLIP2-206ENST00000487091 SEC31BQ9NQW1 1179 aa24.44■■□□□ 1.5
CLIP2-206ENST00000487091 CREBZFQ9NS37 354 aa24.44■■□□□ 1.5
CLIP2-206ENST00000487091 LTBP1Q14766 1721 aa24.44■■□□□ 1.5
CLIP2-206ENST00000487091 COL4A1P02462 1669 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 NEURL1BA8MQ27 555 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 EPS15P42566 896 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 GPSM2P81274 684 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 WASHC4Q2M389 1173 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 CIAPIN1Q6FI81 312 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 MYH16Q9H6N6 1097 aa24.43■■□□□ 1.5
CLIP2-206ENST00000487091 TNIP1Q15025 636 aa24.42■■□□□ 1.5
CLIP2-206ENST00000487091 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
CLIP2-206ENST00000487091 USP50Q70EL3 339 aaPredicted RBP24.42■■□□□ 1.5
CLIP2-206ENST00000487091 PODXL2Q9NZ53 605 aa24.42■■□□□ 1.5
CLIP2-206ENST00000487091 POLLQ9UGP5 575 aa24.42■■□□□ 1.5
CLIP2-206ENST00000487091 C6orf229H3BNL8 230 aa24.41■■□□□ 1.5
CLIP2-206ENST00000487091 H7C1W4 665 aa24.41■■□□□ 1.5
CLIP2-206ENST00000487091 FKBP5Q13451 457 aaPredicted RBP24.41■■□□□ 1.5
CLIP2-206ENST00000487091 CNTROBQ8N137 903 aa24.41■■□□□ 1.5
CLIP2-206ENST00000487091 EYA3Q99504 573 aa24.41■■□□□ 1.5
CLIP2-206ENST00000487091 GPRC5DQ9NZD1 345 aa24.41■■□□□ 1.5
CLIP2-206ENST00000487091 CTSWP56202 376 aa24.4■■□□□ 1.5
CLIP2-206ENST00000487091 DNAAF4Q8WXU2 420 aa24.4■■□□□ 1.5
CLIP2-206ENST00000487091 YDJCA8MPS7 323 aa24.39■■□□□ 1.49
CLIP2-206ENST00000487091 RAD17O75943 681 aa24.39■■□□□ 1.49
CLIP2-206ENST00000487091 MAP1SQ66K74 1059 aaPredicted RBP24.39■■□□□ 1.49
CLIP2-206ENST00000487091 ANKRD18AQ8IVF6 992 aa24.39■■□□□ 1.49
CLIP2-206ENST00000487091 TTLL11Q8NHH1 800 aa24.39■■□□□ 1.49
CLIP2-206ENST00000487091 TBC1D16Q8TBP0 767 aa24.39■■□□□ 1.49
CLIP2-206ENST00000487091 ADARB2Q9NS39 739 aaKnown RBP24.39■■□□□ 1.49
CLIP2-206ENST00000487091 MYH3P11055 1940 aa24.38■■□□□ 1.49
CLIP2-206ENST00000487091 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
CLIP2-206ENST00000487091 GCKRQ14397 625 aa24.38■■□□□ 1.49
CLIP2-206ENST00000487091 LINS1Q8NG48 757 aa24.38■■□□□ 1.49
CLIP2-206ENST00000487091 CCDC85AQ96PX6 553 aaPredicted RBP24.38■■□□□ 1.49
CLIP2-206ENST00000487091 ZNF521Q96K83 1311 aa24.37■■□□□ 1.49
CLIP2-206ENST00000487091 CDC5LQ99459 802 aaKnown RBP24.37■■□□□ 1.49
CLIP2-206ENST00000487091 RTL9Q8NET4 1388 aa24.37■■□□□ 1.49
CLIP2-206ENST00000487091 TMEM88BA6NKF7 163 aa24.36■■□□□ 1.49
CLIP2-206ENST00000487091 RIMBP2O15034 1052 aa24.36■■□□□ 1.49
CLIP2-206ENST00000487091 UBE3BQ7Z3V4 1068 aa24.36■■□□□ 1.49
CLIP2-206ENST00000487091 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
CLIP2-206ENST00000487091 ZC3H12CQ9C0D7 883 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms