RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
SP140-211ENST00000486750 CST9Q5W186 159 aa17.28■□□□□ 0.36
SP140-211ENST00000486750 CAPNS2Q96L46 248 aa17.28■□□□□ 0.36
SP140-211ENST00000486750 GLIS2Q9BZE0 524 aaPredicted RBP17.28■□□□□ 0.36
SP140-211ENST00000486750 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
SP140-211ENST00000486750 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.36
SP140-211ENST00000486750 MPNDQ8N594 471 aa17.27■□□□□ 0.36
SP140-211ENST00000486750 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
SP140-211ENST00000486750 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
SP140-211ENST00000486750 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
SP140-211ENST00000486750 CASP8AP2Q9UKL3 1982 aa17.27■□□□□ 0.36
SP140-211ENST00000486750 YDJCA8MPS7 323 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
SP140-211ENST00000486750 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
SP140-211ENST00000486750 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
SP140-211ENST00000486750 SH3TC1Q8TE82 1336 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 LRRC37AA6NMS7 1700 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
SP140-211ENST00000486750 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
SP140-211ENST00000486750 GRAPQ13588 217 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
SP140-211ENST00000486750 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
SP140-211ENST00000486750 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
SP140-211ENST00000486750 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
SP140-211ENST00000486750 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
SP140-211ENST00000486750 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
SP140-211ENST00000486750 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
SP140-211ENST00000486750 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
SP140-211ENST00000486750 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
SP140-211ENST00000486750 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
SP140-211ENST00000486750 CHL1O00533 1208 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 RALBP1Q15311 655 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
SP140-211ENST00000486750 KCNQ5Q9NR82 932 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
SP140-211ENST00000486750 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
SP140-211ENST00000486750 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
SP140-211ENST00000486750 WDR43Q15061 677 aaKnown RBP eCLIP17.22■□□□□ 0.35
SP140-211ENST00000486750 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
SP140-211ENST00000486750 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
SP140-211ENST00000486750 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
SP140-211ENST00000486750 TLL2Q9Y6L7 1015 aa17.22■□□□□ 0.35
SP140-211ENST00000486750 BBOX1O75936 387 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 EGFRP00533 1210 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
SP140-211ENST00000486750 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
SP140-211ENST00000486750 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
SP140-211ENST00000486750 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
SP140-211ENST00000486750 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
SP140-211ENST00000486750 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 PSMD14O00487 310 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 GPSM2P81274 684 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
SP140-211ENST00000486750 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
SP140-211ENST00000486750 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 USP48Q86UV5 1035 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 ABHD8Q96I13 439 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
SP140-211ENST00000486750 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 PLBD2Q8NHP8 589 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
SP140-211ENST00000486750 MBIPQ9NS73 344 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
SP140-211ENST00000486750 ECE1P42892 770 aa17.18■□□□□ 0.34
SP140-211ENST00000486750 TNIP1Q15025 636 aa17.18■□□□□ 0.34
SP140-211ENST00000486750 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
SP140-211ENST00000486750 IRS4O14654 1257 aaPredicted RBP17.17■□□□□ 0.34
SP140-211ENST00000486750 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
SP140-211ENST00000486750 SAPCD2Q86UD0 394 aa17.17■□□□□ 0.34
SP140-211ENST00000486750 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
SP140-211ENST00000486750 ASTN2O75129 1339 aaPredicted RBP17.17■□□□□ 0.34
SP140-211ENST00000486750 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
SP140-211ENST00000486750 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
SP140-211ENST00000486750 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
SP140-211ENST00000486750 ECE2O60344 883 aa17.16■□□□□ 0.34
SP140-211ENST00000486750 MYD88Q99836 296 aa17.16■□□□□ 0.34
SP140-211ENST00000486750 H7C1D1 291 aa17.15■□□□□ 0.34
SP140-211ENST00000486750 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
SP140-211ENST00000486750 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
SP140-211ENST00000486750 VPS33BQ9H267 617 aa17.15■□□□□ 0.34
SP140-211ENST00000486750 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
SP140-211ENST00000486750 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
SP140-211ENST00000486750 APAF1O14727 1248 aa17.14■□□□□ 0.33
SP140-211ENST00000486750 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
SP140-211ENST00000486750 UFL1O94874 794 aa17.13■□□□□ 0.33
SP140-211ENST00000486750 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms