RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PDE8AO60658 829 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
LRIF1-202ENST00000485275 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 GREM2Q9H772 168 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 MSH5O43196 834 aa18.07■□□□□ 0.48
LRIF1-202ENST00000485275 NBPF5PQ86XG9 351 aaPredicted RBP18.07■□□□□ 0.48
LRIF1-202ENST00000485275 TAF1P21675 1872 aa18.06■□□□□ 0.48
LRIF1-202ENST00000485275 SPEF2Q9C093 1822 aa18.06■□□□□ 0.48
LRIF1-202ENST00000485275 POLRMTO00411 1230 aaKnown RBP18.06■□□□□ 0.48
LRIF1-202ENST00000485275 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
LRIF1-202ENST00000485275 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
LRIF1-202ENST00000485275 SIL1Q9H173 461 aa18.06■□□□□ 0.48
LRIF1-202ENST00000485275 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
LRIF1-202ENST00000485275 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
LRIF1-202ENST00000485275 RGS3P49796 1198 aa18.05■□□□□ 0.48
LRIF1-202ENST00000485275 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
LRIF1-202ENST00000485275 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
LRIF1-202ENST00000485275 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
LRIF1-202ENST00000485275 OTUD7AQ8TE49 926 aaPredicted RBP18.04■□□□□ 0.48
LRIF1-202ENST00000485275 SASH1O94885 1247 aa18.04■□□□□ 0.48
LRIF1-202ENST00000485275 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
LRIF1-202ENST00000485275 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
LRIF1-202ENST00000485275 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
LRIF1-202ENST00000485275 SERPINB2P05120 415 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 ITGA6P23229 1130 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 CNBD1Q8NA66 436 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 RHPN1Q8TCX5 695 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.48
LRIF1-202ENST00000485275 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.47
LRIF1-202ENST00000485275 PUS3Q9BZE2 481 aaKnown RBP18.02■□□□□ 0.47
LRIF1-202ENST00000485275 BCL11AQ9H165 835 aa18.02■□□□□ 0.47
LRIF1-202ENST00000485275 SEC31BQ9NQW1 1179 aa18.02■□□□□ 0.47
LRIF1-202ENST00000485275 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 RTL9Q8NET4 1388 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 LRRC24Q50LG9 513 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 A0A1B0GUL6 1792 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 SALL3Q9BXA9 1300 aa18.01■□□□□ 0.47
LRIF1-202ENST00000485275 RAB11FIP3O75154 756 aa18■□□□□ 0.47
LRIF1-202ENST00000485275 MMP10P09238 476 aa18■□□□□ 0.47
LRIF1-202ENST00000485275 GTF2E1P29083 439 aaPredicted RBP18■□□□□ 0.47
LRIF1-202ENST00000485275 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
LRIF1-202ENST00000485275 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
LRIF1-202ENST00000485275 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
LRIF1-202ENST00000485275 SF3B3Q15393 1217 aaKnown RBP17.99■□□□□ 0.47
LRIF1-202ENST00000485275 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
LRIF1-202ENST00000485275 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
LRIF1-202ENST00000485275 EYA2O00167 538 aa17.98■□□□□ 0.47
LRIF1-202ENST00000485275 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
LRIF1-202ENST00000485275 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
LRIF1-202ENST00000485275 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
LRIF1-202ENST00000485275 HSP90AB4PQ58FF6 505 aa17.97■□□□□ 0.47
LRIF1-202ENST00000485275 PLEKHM2Q8IWE5 1019 aa17.97■□□□□ 0.47
LRIF1-202ENST00000485275 TFCP2Q12800 502 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 NPHP1O15259 732 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 CIAO1O76071 339 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 TSHZ3Q63HK5 1081 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
LRIF1-202ENST00000485275 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
LRIF1-202ENST00000485275 ERC1Q8IUD2 1116 aa17.95■□□□□ 0.46
LRIF1-202ENST00000485275 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
LRIF1-202ENST00000485275 TLR7Q9NYK1 1049 aaKnown RBP17.95■□□□□ 0.46
LRIF1-202ENST00000485275 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
LRIF1-202ENST00000485275 ZNF609O15014 1411 aa17.94■□□□□ 0.46
LRIF1-202ENST00000485275 ST5P78524 1137 aa17.94■□□□□ 0.46
LRIF1-202ENST00000485275 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
LRIF1-202ENST00000485275 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
LRIF1-202ENST00000485275 IL15P40933 162 aaPredicted RBP17.94■□□□□ 0.46
LRIF1-202ENST00000485275 R3HDM1Q15032 1099 aaKnown RBP17.94■□□□□ 0.46
LRIF1-202ENST00000485275 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
LRIF1-202ENST00000485275 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
LRIF1-202ENST00000485275 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
LRIF1-202ENST00000485275 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
LRIF1-202ENST00000485275 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
LRIF1-202ENST00000485275 KLRG2A4D1S0 409 aaPredicted RBP17.92■□□□□ 0.46
LRIF1-202ENST00000485275 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
LRIF1-202ENST00000485275 TNNI3KQ59H18 835 aa17.92■□□□□ 0.46
LRIF1-202ENST00000485275 FBXO3Q9UK99 471 aa17.92■□□□□ 0.46
LRIF1-202ENST00000485275 FPGT-TNNI3KV9GXZ4 949 aa17.92■□□□□ 0.46
LRIF1-202ENST00000485275 PDE1AP54750 535 aa17.91■□□□□ 0.46
LRIF1-202ENST00000485275 AACSQ86V21 672 aa17.91■□□□□ 0.46
LRIF1-202ENST00000485275 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
LRIF1-202ENST00000485275 ARAP2Q8WZ64 1704 aa17.91■□□□□ 0.46
LRIF1-202ENST00000485275 MX1P20591 662 aa17.91■□□□□ 0.46
LRIF1-202ENST00000485275 CLASRPQ8N2M8 674 aaKnown RBP17.91■□□□□ 0.46
LRIF1-202ENST00000485275 CCDC8Q9H0W5 538 aaPredicted RBP17.91■□□□□ 0.46
LRIF1-202ENST00000485275 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
LRIF1-202ENST00000485275 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
LRIF1-202ENST00000485275 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
LRIF1-202ENST00000485275 OSBPL3Q9H4L5 887 aa17.9■□□□□ 0.46
LRIF1-202ENST00000485275 PSDA5PKW4 1024 aaPredicted RBP17.89■□□□□ 0.45
LRIF1-202ENST00000485275 PI4K2BQ8TCG2 481 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
LRIF1-202ENST00000485275 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
LRIF1-202ENST00000485275 BRIP1Q9BX63 1249 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms