RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
SORT1-206ENST00000485149 SLC4A5Q9BY07 1137 aa8.45□□□□□ -1.06
SORT1-206ENST00000485149 SRP68Q9UHB9 627 aaKnown RBP8.45□□□□□ -1.06
SORT1-206ENST00000485149 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
SORT1-206ENST00000485149 TNRC18O15417 2968 aaPredicted RBP8.45□□□□□ -1.06
SORT1-206ENST00000485149 THSD7BQ9C0I4 1608 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 HSPA5P11021 654 aaKnown RBP8.44□□□□□ -1.06
SORT1-206ENST00000485149 PHKG2P15735 406 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 PTPREP23469 700 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 KCNA1Q09470 495 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 MPNDQ8N594 471 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 POM121Q96HA1 1249 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 IGSF5Q9NSI5 407 aa8.44□□□□□ -1.06
SORT1-206ENST00000485149 DICER1Q9UPY3 1922 aaKnown RBP8.44□□□□□ -1.06
SORT1-206ENST00000485149 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
SORT1-206ENST00000485149 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
SORT1-206ENST00000485149 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
SORT1-206ENST00000485149 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
SORT1-206ENST00000485149 SCN4AP35499 1836 aa8.43□□□□□ -1.06
SORT1-206ENST00000485149 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 H0YIN7 160 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
SORT1-206ENST00000485149 CRKLP46109 303 aaKnown RBP8.42□□□□□ -1.06
SORT1-206ENST00000485149 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 SPNS2Q8IVW8 549 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 ADAM33Q9BZ11 813 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 TAF1DQ9H5J8 278 aaPredicted RBP8.42□□□□□ -1.06
SORT1-206ENST00000485149 BCCIPQ9P287 314 aaKnown RBP eCLIP8.42□□□□□ -1.06
SORT1-206ENST00000485149 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
SORT1-206ENST00000485149 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
SORT1-206ENST00000485149 AFDNP55196 1824 aaKnown RBP8.41□□□□□ -1.06
SORT1-206ENST00000485149 ADAMTS7Q9UKP4 1686 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 LTBP3Q9NS15 1303 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 FYB1O15117 783 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 ZPR1O75312 459 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
SORT1-206ENST00000485149 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 MCOLN1Q9GZU1 580 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
SORT1-206ENST00000485149 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
SORT1-206ENST00000485149 FER1L6Q2WGJ9 1857 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 ADAMTSL1Q8N6G6 1762 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 HSP90AB1P08238 724 aaKnown RBP8.4□□□□□ -1.06
SORT1-206ENST00000485149 ECE1P42892 770 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
SORT1-206ENST00000485149 DDX12PQ92771 950 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 KCNK17Q96T54 332 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 PSMD1Q99460 953 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
SORT1-206ENST00000485149 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 C21orf2O43822 256 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 SERPINB2P05120 415 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 NFIXQ14938 502 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 EAPPQ56P03 285 aaPredicted RBP8.39□□□□□ -1.07
SORT1-206ENST00000485149 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
SORT1-206ENST00000485149 CNTROBQ8N137 903 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 TJP1Q07157 1748 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 LTBP1Q14766 1721 aa8.39□□□□□ -1.07
SORT1-206ENST00000485149 CARMIL3Q8ND23 1372 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 ANKRD26Q9UPS8 1709 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 CA12O43570 354 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
SORT1-206ENST00000485149 BRD1O95696 1058 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 PSEN2P49810 448 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 CABP4P57796 275 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 ADGRD1Q6QNK2 874 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 TICAM2Q86XR7 235 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 CAPNS2Q96L46 248 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
SORT1-206ENST00000485149 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
SORT1-206ENST00000485149 EYA1Q99502 592 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 NARFQ9UHQ1 456 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 HACL1Q9UJ83 578 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 KIF20BQ96Q89 1820 aa8.38□□□□□ -1.07
SORT1-206ENST00000485149 SOS1Q07889 1333 aaPredicted RBP8.37□□□□□ -1.07
SORT1-206ENST00000485149 SMARCA5O60264 1052 aaPredicted RBP8.37□□□□□ -1.07
SORT1-206ENST00000485149 EPHX2P34913 555 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 PDE6BP35913 854 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 MAP2K2P36507 400 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 DGKZQ13574 1117 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
SORT1-206ENST00000485149 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 INTS5Q6P9B9 1019 aaKnown RBP8.37□□□□□ -1.07
SORT1-206ENST00000485149 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
SORT1-206ENST00000485149 CARD14Q9BXL6 1004 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.37□□□□□ -1.07
SORT1-206ENST00000485149 EMILIN1Q9Y6C2 1016 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 PDE4DIPQ5VU43 2346 aa8.37□□□□□ -1.07
SORT1-206ENST00000485149 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
SORT1-206ENST00000485149 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
SORT1-206ENST00000485149 CYP4F22Q6NT55 531 aa8.36□□□□□ -1.07
SORT1-206ENST00000485149 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms