RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SMC4Q9NTJ3 1288 aa24.32■■□□□ 1.48
SNX17-206ENST00000484886 CDHR2Q9BYE9 1310 aa24.32■■□□□ 1.48
SNX17-206ENST00000484886 CT47B1P0C2W7 299 aaPredicted RBP24.31■■□□□ 1.48
SNX17-206ENST00000484886 TAF1P21675 1872 aa24.31■■□□□ 1.48
SNX17-206ENST00000484886 CCDC152Q4G0S7 254 aa24.31■■□□□ 1.48
SNX17-206ENST00000484886 CCDC85AQ96PX6 553 aaPredicted RBP24.31■■□□□ 1.48
SNX17-206ENST00000484886 ZNF277Q9NRM2 450 aaPredicted RBP24.31■■□□□ 1.48
SNX17-206ENST00000484886 ATP6V0A2Q9Y487 856 aa24.31■■□□□ 1.48
SNX17-206ENST00000484886 ALDH1L2Q3SY69 923 aa24.3■■□□□ 1.48
SNX17-206ENST00000484886 SLC51AQ86UW1 340 aa24.3■■□□□ 1.48
SNX17-206ENST00000484886 ZC3H4Q9UPT8 1303 aaKnown RBP24.3■■□□□ 1.48
SNX17-206ENST00000484886 GRIPAP1Q4V328 841 aa24.29■■□□□ 1.48
SNX17-206ENST00000484886 DICER1Q9UPY3 1922 aaKnown RBP24.28■■□□□ 1.48
SNX17-206ENST00000484886 BEND3Q5T5X7 828 aa24.28■■□□□ 1.48
SNX17-206ENST00000484886 CELF1Q92879 486 aaKnown RBP24.28■■□□□ 1.48
SNX17-206ENST00000484886 PTPRCP08575 1304 aa24.28■■□□□ 1.48
SNX17-206ENST00000484886 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
SNX17-206ENST00000484886 H7C1W4 665 aa24.27■■□□□ 1.48
SNX17-206ENST00000484886 CTSWP56202 376 aa24.27■■□□□ 1.48
SNX17-206ENST00000484886 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
SNX17-206ENST00000484886 SP8Q8IXZ3 490 aa24.27■■□□□ 1.48
SNX17-206ENST00000484886 PSMD1Q99460 953 aa24.27■■□□□ 1.48
SNX17-206ENST00000484886 MYH3P11055 1940 aa24.26■■□□□ 1.47
SNX17-206ENST00000484886 IARSP41252 1262 aaKnown RBP24.26■■□□□ 1.47
SNX17-206ENST00000484886 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
SNX17-206ENST00000484886 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
SNX17-206ENST00000484886 DPP8Q6V1X1 898 aaPredicted RBP24.25■■□□□ 1.47
SNX17-206ENST00000484886 RPS8P62241 208 aaKnown RBP24.24■■□□□ 1.47
SNX17-206ENST00000484886 MPNDQ8N594 471 aa24.24■■□□□ 1.47
SNX17-206ENST00000484886 C9orf78Q9NZ63 289 aaPredicted RBP24.24■■□□□ 1.47
SNX17-206ENST00000484886 ZBED9Q6R2W3 1325 aa24.24■■□□□ 1.47
SNX17-206ENST00000484886 SNED1Q8TER0 1413 aa24.24■■□□□ 1.47
SNX17-206ENST00000484886 ALDH1L1O75891 902 aa24.23■■□□□ 1.47
SNX17-206ENST00000484886 DPY19L2Q6NUT2 758 aa24.23■■□□□ 1.47
SNX17-206ENST00000484886 NMRK2Q9NPI5 230 aa24.23■■□□□ 1.47
SNX17-206ENST00000484886 LARGE2Q8N3Y3 721 aa24.22■■□□□ 1.47
SNX17-206ENST00000484886 SUPT20HQ8NEM7 779 aa24.22■■□□□ 1.47
SNX17-206ENST00000484886 TTLL11Q8NHH1 800 aa24.22■■□□□ 1.47
SNX17-206ENST00000484886 JDP2Q8WYK2 163 aa24.22■■□□□ 1.47
SNX17-206ENST00000484886 COL4A1P02462 1669 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 GLTPD2A6NH11 291 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 GRM8O00222 908 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 CASP7P55210 303 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 ANKRD18AQ8IVF6 992 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 CDC5LQ99459 802 aaKnown RBP24.21■■□□□ 1.47
SNX17-206ENST00000484886 GREM2Q9H772 168 aa24.21■■□□□ 1.47
SNX17-206ENST00000484886 PPIP5K2O43314 1243 aa24.2■■□□□ 1.46
SNX17-206ENST00000484886 RARSP54136 660 aaKnown RBP24.2■■□□□ 1.46
SNX17-206ENST00000484886 PLA2G12BQ9BX93 195 aa24.2■■□□□ 1.46
SNX17-206ENST00000484886 NOB1Q9ULX3 412 aaKnown RBP24.2■■□□□ 1.46
SNX17-206ENST00000484886 NSFL1CQ9UNZ2 370 aaKnown RBP24.2■■□□□ 1.46
SNX17-206ENST00000484886 CHMP3Q9Y3E7 222 aa24.2■■□□□ 1.46
SNX17-206ENST00000484886 LRRC37AA6NMS7 1700 aa24.2■■□□□ 1.46
SNX17-206ENST00000484886 RRAGCQ9HB90 399 aa24.19■■□□□ 1.46
SNX17-206ENST00000484886 AOC3Q16853 763 aa24.18■■□□□ 1.46
SNX17-206ENST00000484886 NIM1KQ8IY84 436 aa24.18■■□□□ 1.46
SNX17-206ENST00000484886 SPEF2Q9C093 1822 aa24.18■■□□□ 1.46
SNX17-206ENST00000484886 KIF16BQ96L93 1317 aa24.17■■□□□ 1.46
SNX17-206ENST00000484886 GPSM2P81274 684 aa24.17■■□□□ 1.46
SNX17-206ENST00000484886 FAM161AQ3B820 660 aa24.17■■□□□ 1.46
SNX17-206ENST00000484886 C16orf71Q8IYS4 520 aaPredicted RBP24.17■■□□□ 1.46
SNX17-206ENST00000484886 RTFDC1Q9BY42 306 aaPredicted RBP24.17■■□□□ 1.46
SNX17-206ENST00000484886 ANKIB1Q9P2G1 1089 aa24.17■■□□□ 1.46
SNX17-206ENST00000484886 RTL9Q8NET4 1388 aa24.16■■□□□ 1.46
SNX17-206ENST00000484886 C6orf229H3BNL8 230 aa24.16■■□□□ 1.46
SNX17-206ENST00000484886 KIF3CO14782 793 aa24.16■■□□□ 1.46
SNX17-206ENST00000484886 API5Q9BZZ5 524 aaKnown RBP24.16■■□□□ 1.46
SNX17-206ENST00000484886 ZNF541Q9H0D2 1346 aa24.15■■□□□ 1.46
SNX17-206ENST00000484886 ITGA6P23229 1130 aa24.15■■□□□ 1.46
SNX17-206ENST00000484886 IGHMBP2P38935 993 aaKnown RBP24.15■■□□□ 1.46
SNX17-206ENST00000484886 EIF6P56537 245 aaKnown RBP24.15■■□□□ 1.46
SNX17-206ENST00000484886 DDNO94850 711 aaPredicted RBP24.14■■□□□ 1.45
SNX17-206ENST00000484886 BRPF1P55201 1214 aaPredicted RBP24.14■■□□□ 1.45
SNX17-206ENST00000484886 C1QTNF8P60827 252 aa24.14■■□□□ 1.45
SNX17-206ENST00000484886 VPS33BQ9H267 617 aa24.14■■□□□ 1.45
SNX17-206ENST00000484886 DUOX1Q9NRD9 1551 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 ANKRD18BA2A2Z9 1011 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 FZD9O00144 591 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 CSF1RP07333 972 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 FOXO4P98177 505 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 LMBR1LQ6UX01 489 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 FRAT1Q92837 279 aaPredicted RBP24.13■■□□□ 1.45
SNX17-206ENST00000484886 COL4A5P29400 1685 aa24.13■■□□□ 1.45
SNX17-206ENST00000484886 UFL1O94874 794 aa24.12■■□□□ 1.45
SNX17-206ENST00000484886 NBPF7P0C2Y1 421 aaPredicted RBP24.12■■□□□ 1.45
SNX17-206ENST00000484886 VEGFAP15692 232 aaPredicted RBP24.12■■□□□ 1.45
SNX17-206ENST00000484886 CCT4P50991 539 aaKnown RBP24.12■■□□□ 1.45
SNX17-206ENST00000484886 KIAA2012Q0VF49 1180 aa24.12■■□□□ 1.45
SNX17-206ENST00000484886 IFIT5Q13325 482 aaKnown RBP24.12■■□□□ 1.45
SNX17-206ENST00000484886 WASHC4Q2M389 1173 aa24.12■■□□□ 1.45
SNX17-206ENST00000484886 EYA3Q99504 573 aa24.12■■□□□ 1.45
SNX17-206ENST00000484886 MPHOSPH8Q99549 860 aa24.12■■□□□ 1.45
SNX17-206ENST00000484886 WDR90Q96KV7 1748 aa24.11■■□□□ 1.45
SNX17-206ENST00000484886 RIMBP2O15034 1052 aa24.11■■□□□ 1.45
SNX17-206ENST00000484886 IPO8O15397 1037 aaKnown RBP24.11■■□□□ 1.45
SNX17-206ENST00000484886 BCAR3O75815 825 aa24.11■■□□□ 1.45
SNX17-206ENST00000484886 EPHA10Q5JZY3 1008 aa24.11■■□□□ 1.45
SNX17-206ENST00000484886 SUCLG2Q96I99 432 aa24.11■■□□□ 1.45
SNX17-206ENST00000484886 BSDC1Q9NW68 430 aaPredicted RBP24.11■■□□□ 1.45
SNX17-206ENST00000484886 POLLQ9UGP5 575 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms