RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 AOC3Q16853 763 aa14.87□□□□□ -0.03
SCFD1-206ENST00000484733 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-206ENST00000484733 USP50Q70EL3 339 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-206ENST00000484733 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
SCFD1-206ENST00000484733 LRRC37AA6NMS7 1700 aa14.87□□□□□ -0.03
SCFD1-206ENST00000484733 KIAA2012Q0VF49 1180 aa14.87□□□□□ -0.03
SCFD1-206ENST00000484733 CHMP4AQ9BY43 222 aa14.87□□□□□ -0.03
SCFD1-206ENST00000484733 COL13A1Q5TAT6 717 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-206ENST00000484733 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
SCFD1-206ENST00000484733 EPS15P42566 896 aa14.86□□□□□ -0.03
SCFD1-206ENST00000484733 MAP1SQ66K74 1059 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-206ENST00000484733 CXCL9Q07325 125 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 FAM89AQ96GI7 184 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 ATP5J2-PTCD1G3V325 749 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 GPRC5DQ9NZD1 345 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 TAF1P21675 1872 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 DUOX1Q9NRD9 1551 aa14.84□□□□□ -0.03
SCFD1-206ENST00000484733 RASSF10A6NK89 507 aa14.83□□□□□ -0.03
SCFD1-206ENST00000484733 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.03
SCFD1-206ENST00000484733 GOLGA2Q08379 1002 aa14.83□□□□□ -0.03
SCFD1-206ENST00000484733 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.03
SCFD1-206ENST00000484733 ADARB2Q9NS39 739 aaKnown RBP14.83□□□□□ -0.03
SCFD1-206ENST00000484733 TNIP1Q15025 636 aa14.83□□□□□ -0.04
SCFD1-206ENST00000484733 CIAPIN1Q6FI81 312 aa14.83□□□□□ -0.04
SCFD1-206ENST00000484733 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
SCFD1-206ENST00000484733 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
SCFD1-206ENST00000484733 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
SCFD1-206ENST00000484733 CCDC27Q2M243 656 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
SCFD1-206ENST00000484733 VEGFBP49765 207 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 C8orf58Q8NAV2 365 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 CCDC191Q8NCU4 936 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 PGAP2Q9UHJ9 254 aa14.82□□□□□ -0.04
SCFD1-206ENST00000484733 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
SCFD1-206ENST00000484733 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
SCFD1-206ENST00000484733 GMPSP49915 693 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-206ENST00000484733 DEFB115Q30KQ5 88 aa14.81□□□□□ -0.04
SCFD1-206ENST00000484733 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 PCCAP05165 728 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 YDJCA8MPS7 323 aa14.8□□□□□ -0.04
SCFD1-206ENST00000484733 DDX58O95786 925 aaKnown RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 TNS4Q8IZW8 715 aa14.8□□□□□ -0.04
SCFD1-206ENST00000484733 ZC3H15Q8WU90 426 aaKnown RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 MYD88Q99836 296 aa14.8□□□□□ -0.04
SCFD1-206ENST00000484733 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
SCFD1-206ENST00000484733 WASHC4Q2M389 1173 aa14.79□□□□□ -0.04
SCFD1-206ENST00000484733 COL4A1P02462 1669 aa14.79□□□□□ -0.04
SCFD1-206ENST00000484733 GPSM2P81274 684 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 EYA3Q99504 573 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 CWC25Q9NXE8 425 aaPredicted RBP14.78□□□□□ -0.04
SCFD1-206ENST00000484733 PODXL2Q9NZ53 605 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 NSFL1CQ9UNZ2 370 aaKnown RBP14.78□□□□□ -0.04
SCFD1-206ENST00000484733 IL16Q14005 1332 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 RAD17O75943 681 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 DPF2Q92785 391 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 BCL2L13Q9BXK5 485 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 PRDM10Q9NQV6 1147 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 POLLQ9UGP5 575 aa14.78□□□□□ -0.04
SCFD1-206ENST00000484733 PDE8AO60658 829 aa14.77□□□□□ -0.04
SCFD1-206ENST00000484733 RTL5Q5HYW3 569 aaPredicted RBP14.77□□□□□ -0.04
SCFD1-206ENST00000484733 TSPYL6Q8N831 410 aa14.77□□□□□ -0.04
SCFD1-206ENST00000484733 THSD7BQ9C0I4 1608 aa14.77□□□□□ -0.04
SCFD1-206ENST00000484733 WDR33Q9C0J8 1336 aaKnown RBP14.77□□□□□ -0.04
SCFD1-206ENST00000484733 FOXN1O15353 648 aa14.77□□□□□ -0.05
SCFD1-206ENST00000484733 CCDC152Q4G0S7 254 aa14.77□□□□□ -0.05
SCFD1-206ENST00000484733 CST9Q5W186 159 aa14.77□□□□□ -0.05
SCFD1-206ENST00000484733 KSR2Q6VAB6 950 aa14.77□□□□□ -0.05
SCFD1-206ENST00000484733 ABT1Q9ULW3 272 aaKnown RBP14.77□□□□□ -0.05
SCFD1-206ENST00000484733 CTCFP49711 727 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-206ENST00000484733 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 TBC1D16Q8TBP0 767 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 AIDAQ96BJ3 306 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
SCFD1-206ENST00000484733 TLL2Q9Y6L7 1015 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 H7C1D1 291 aa14.76□□□□□ -0.05
SCFD1-206ENST00000484733 RPS12P25398 132 aaKnown RBP14.76□□□□□ -0.05
SCFD1-206ENST00000484733 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-206ENST00000484733 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-206ENST00000484733 FMR1Q06787 632 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCFD1-206ENST00000484733 SEC31BQ9NQW1 1179 aa14.75□□□□□ -0.05
SCFD1-206ENST00000484733 MAP3K2Q9Y2U5 619 aa14.75□□□□□ -0.05
SCFD1-206ENST00000484733 TRAF5O00463 557 aa14.75□□□□□ -0.05
SCFD1-206ENST00000484733 PSMD14O00487 310 aa14.75□□□□□ -0.05
SCFD1-206ENST00000484733 ECE1P42892 770 aa14.75□□□□□ -0.05
SCFD1-206ENST00000484733 MAP2K1Q02750 393 aaPredicted RBP14.75□□□□□ -0.05
SCFD1-206ENST00000484733 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 ECE2O60344 883 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 TRPM4Q8TD43 1214 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 HHIPL1Q96JK4 782 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 STK31Q9BXU1 1019 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 DBNDD1Q9H9R9 158 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 CDC37L1Q7L3B6 337 aa14.74□□□□□ -0.05
SCFD1-206ENST00000484733 MICALL2Q8IY33 904 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms