RNA–Protein interactions for RNA: ENST00000484377.5

TMEM50B-209, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-209ENST00000484377 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 TMPOP42166 694 aaKnown RBP11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 MCM10Q7L590 875 aa11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 GAS2L2Q8NHY3 880 aa11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
TMEM50B-209ENST00000484377 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
TMEM50B-209ENST00000484377 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
TMEM50B-209ENST00000484377 PRR7Q8TB68 274 aa11.93□□□□□ -0.5
TMEM50B-209ENST00000484377 ASAP1Q9ULH1 1129 aa11.93□□□□□ -0.5
TMEM50B-209ENST00000484377 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 APAF1O14727 1248 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 APBA3O96018 575 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 KCNQ4P56696 695 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 NFATC2IPQ8NCF5 419 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
TMEM50B-209ENST00000484377 GPR37L1O60883 481 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 UCN2Q96RP3 112 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 TJP1Q07157 1748 aa11.91□□□□□ -0.5
TMEM50B-209ENST00000484377 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 KCNQ3O43525 872 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 HLA-CQ95604 372 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
TMEM50B-209ENST00000484377 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 CFAP99D6REC4 459 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 PLSCR1O15162 318 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 RIPK4P57078 832 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
TMEM50B-209ENST00000484377 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
TMEM50B-209ENST00000484377 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
TMEM50B-209ENST00000484377 CABP4P57796 275 aa11.88□□□□□ -0.51
TMEM50B-209ENST00000484377 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
TMEM50B-209ENST00000484377 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
TMEM50B-209ENST00000484377 C5P01031 1676 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 ATP9BO43861 1147 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 BAG6P46379 1132 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 ITPK1Q13572 414 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
TMEM50B-209ENST00000484377 SLC10A3P09131 477 aa11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 NR6A1Q15406 480 aa11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 PROX2Q3B8N5 592 aa11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
TMEM50B-209ENST00000484377 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
TMEM50B-209ENST00000484377 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
TMEM50B-209ENST00000484377 ZNF521Q96K83 1311 aa11.85□□□□□ -0.51
TMEM50B-209ENST00000484377 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 LOC102724428A0A0B4J2F2 783 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 SIK1P57059 783 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 TEFQ10587 303 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
TMEM50B-209ENST00000484377 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 NEFMP07197 916 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
TMEM50B-209ENST00000484377 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 CHL1O00533 1208 aa11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 FUT2Q10981 343 aa11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 KRT24Q2M2I5 525 aa11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
TMEM50B-209ENST00000484377 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms