RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 ATP6V0A2Q9Y487 856 aa15.63■□□□□ 0.09
SHANK1-208ENST00000483981 PPEF1O14829 653 aaPredicted RBP15.62■□□□□ 0.09
SHANK1-208ENST00000483981 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
SHANK1-208ENST00000483981 HSP90B1P14625 803 aaKnown RBP15.62■□□□□ 0.09
SHANK1-208ENST00000483981 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
SHANK1-208ENST00000483981 UBE3BQ7Z3V4 1068 aa15.62■□□□□ 0.09
SHANK1-208ENST00000483981 CELF1Q92879 486 aaKnown RBP15.62■□□□□ 0.09
SHANK1-208ENST00000483981 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
SHANK1-208ENST00000483981 LMNB1P20700 586 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 CC2D2BQ6DHV5 1058 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 TTLL11Q8NHH1 800 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 TAOK3Q9H2K8 898 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
SHANK1-208ENST00000483981 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
SHANK1-208ENST00000483981 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 CSF1RP07333 972 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHANK1-208ENST00000483981 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 SRCIN1Q9C0H9 1055 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 UTYO14607 1347 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
SHANK1-208ENST00000483981 RTL9Q8NET4 1388 aa15.6■□□□□ 0.09
SHANK1-208ENST00000483981 MYH3P11055 1940 aa15.59■□□□□ 0.09
SHANK1-208ENST00000483981 CTSWP56202 376 aa15.59■□□□□ 0.09
SHANK1-208ENST00000483981 FOXO4P98177 505 aa15.59■□□□□ 0.09
SHANK1-208ENST00000483981 GRIPAP1Q4V328 841 aa15.59■□□□□ 0.09
SHANK1-208ENST00000483981 PSMD1Q99460 953 aa15.59■□□□□ 0.09
SHANK1-208ENST00000483981 GRM8O00222 908 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 BCAR3O75815 825 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
SHANK1-208ENST00000483981 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 KAZALD1Q96I82 304 aa15.58■□□□□ 0.08
SHANK1-208ENST00000483981 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-208ENST00000483981 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
SHANK1-208ENST00000483981 CCDC85AQ96PX6 553 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-208ENST00000483981 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-208ENST00000483981 GREM2Q9H772 168 aa15.57■□□□□ 0.08
SHANK1-208ENST00000483981 ZNF277Q9NRM2 450 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-208ENST00000483981 ZC3H4Q9UPT8 1303 aaKnown RBP15.57■□□□□ 0.08
SHANK1-208ENST00000483981 DUOX1Q9NRD9 1551 aa15.57■□□□□ 0.08
SHANK1-208ENST00000483981 COL4A5P29400 1685 aa15.57■□□□□ 0.08
SHANK1-208ENST00000483981 LTBP1Q14766 1721 aa15.57■□□□□ 0.08
SHANK1-208ENST00000483981 USP44Q9H0E7 712 aa15.56■□□□□ 0.08
SHANK1-208ENST00000483981 TIAM2Q8IVF5 1701 aa15.56■□□□□ 0.08
SHANK1-208ENST00000483981 KIF16BQ96L93 1317 aa15.55■□□□□ 0.08
SHANK1-208ENST00000483981 API5Q9BZZ5 524 aaKnown RBP15.55■□□□□ 0.08
SHANK1-208ENST00000483981 IARSP41252 1262 aaKnown RBP15.54■□□□□ 0.08
SHANK1-208ENST00000483981 SUCLG2Q96I99 432 aa15.54■□□□□ 0.08
SHANK1-208ENST00000483981 C9orf78Q9NZ63 289 aaPredicted RBP15.54■□□□□ 0.08
SHANK1-208ENST00000483981 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
SHANK1-208ENST00000483981 GPSM2P81274 684 aa15.53■□□□□ 0.08
SHANK1-208ENST00000483981 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
SHANK1-208ENST00000483981 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
SHANK1-208ENST00000483981 MPNDQ8N594 471 aa15.53■□□□□ 0.08
SHANK1-208ENST00000483981 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
SHANK1-208ENST00000483981 FZD9O00144 591 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 TRIM27P14373 513 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 ITGA6P23229 1130 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 CCT4P50991 539 aaKnown RBP15.52■□□□□ 0.08
SHANK1-208ENST00000483981 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
SHANK1-208ENST00000483981 DPP8Q6V1X1 898 aaPredicted RBP15.52■□□□□ 0.08
SHANK1-208ENST00000483981 ATF7IPQ6VMQ6 1270 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 CDC5LQ99459 802 aaKnown RBP15.52■□□□□ 0.08
SHANK1-208ENST00000483981 BSDC1Q9NW68 430 aaPredicted RBP15.52■□□□□ 0.08
SHANK1-208ENST00000483981 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.08
SHANK1-208ENST00000483981 GLTPD2A6NH11 291 aa15.51■□□□□ 0.07
SHANK1-208ENST00000483981 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
SHANK1-208ENST00000483981 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
SHANK1-208ENST00000483981 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-208ENST00000483981 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-208ENST00000483981 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-208ENST00000483981 POLLQ9UGP5 575 aa15.51■□□□□ 0.07
SHANK1-208ENST00000483981 KIF3CO14782 793 aa15.5■□□□□ 0.07
SHANK1-208ENST00000483981 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
SHANK1-208ENST00000483981 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
SHANK1-208ENST00000483981 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
SHANK1-208ENST00000483981 MINPP1Q9UNW1 487 aa15.5■□□□□ 0.07
SHANK1-208ENST00000483981 NSFL1CQ9UNZ2 370 aaKnown RBP15.5■□□□□ 0.07
SHANK1-208ENST00000483981 WTIPA6NIX2 430 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-208ENST00000483981 POTECB2RU33 542 aa15.49■□□□□ 0.07
SHANK1-208ENST00000483981 AOC3Q16853 763 aa15.49■□□□□ 0.07
SHANK1-208ENST00000483981 TBC1D16Q8TBP0 767 aa15.49■□□□□ 0.07
SHANK1-208ENST00000483981 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-208ENST00000483981 BICC1Q9H694 974 aaKnown RBP15.49■□□□□ 0.07
SHANK1-208ENST00000483981 NMRK2Q9NPI5 230 aa15.49■□□□□ 0.07
SHANK1-208ENST00000483981 SPEF2Q9C093 1822 aa15.49■□□□□ 0.07
SHANK1-208ENST00000483981 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 PPIP5K2O43314 1243 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
SHANK1-208ENST00000483981 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 LARGE2Q8N3Y3 721 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 WDR90Q96KV7 1748 aa15.48■□□□□ 0.07
SHANK1-208ENST00000483981 KDM2BQ8NHM5 1336 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms