RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 TNNI3KQ59H18 835 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 CNTROBQ8N137 903 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 BOLA2Q9H3K6 86 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 FPGT-TNNI3KV9GXZ4 949 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 PALLDQ8WX93 1383 aa10.77□□□□□ -0.68
CDC42SE1-204ENST00000483763 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
CDC42SE1-204ENST00000483763 NFKBIBQ15653 356 aa10.77□□□□□ -0.69
CDC42SE1-204ENST00000483763 CWC27Q6UX04 472 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-204ENST00000483763 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
CDC42SE1-204ENST00000483763 EDC3Q96F86 508 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-204ENST00000483763 SGSM2O43147 1006 aa10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 SMIM5Q71RC9 77 aa10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 TIMM10P62072 90 aa10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
CDC42SE1-204ENST00000483763 CSF1RP07333 972 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 GPATCH3Q96I76 525 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 ERVV-1B6SEH8 477 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 FRAT2O75474 233 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 CHGBP05060 677 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 RABEP1Q15276 862 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 PROM2Q8N271 834 aa10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 PDGFDQ9GZP0 370 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-204ENST00000483763 EYA2O00167 538 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 EVI5LQ96CN4 794 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 FAM227BQ96M60 508 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 PLA2G12BQ9BX93 195 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 K7ELQ4 463 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 DDIT3P35638 169 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 CCDC57Q2TAC2 916 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 LINC00116Q8NCU8 138 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 SMARCC1Q92922 1105 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 LSG1Q9H089 658 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 GREM2Q9H772 168 aa10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-204ENST00000483763 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 CAMTA2O94983 1202 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 IL15P40933 162 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 R3HDM1Q15032 1099 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 HSP90AB3PQ58FF7 597 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 CAMKK2Q96RR4 588 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 FAM177BA6PVY3 158 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 ATP5JP18859 108 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 PTH1RQ03431 593 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
CDC42SE1-204ENST00000483763 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 NUP98P52948 1817 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 HSPA4P34932 840 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 BAG6P46379 1132 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 RAD50Q92878 1312 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 A0A0D9SFI3 127 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 CIAO1O76071 339 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 ITGA6P23229 1130 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 CTSWP56202 376 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 IFIT5Q13325 482 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
CDC42SE1-204ENST00000483763 A0A1B0GUL7 405 aa10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 HCLS1P14317 486 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 NEK4P51957 841 aa10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 NMIQ13287 307 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 AMIGO3Q86WK7 504 aa10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 UPF3BQ9BZI7 483 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-204ENST00000483763 SBF2Q86WG5 1849 aa10.71□□□□□ -0.7
CDC42SE1-204ENST00000483763 SLFNL1Q499Z3 407 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 FSD1Q9BTV5 496 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 RIPOR2Q9Y4F9 1068 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 ADORA1P30542 326 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 DEKP35659 375 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 DDX46Q7L014 1031 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 IL17RAQ96F46 866 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 HAUS7Q99871 368 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 GPR108Q9NPR9 543 aa10.7□□□□□ -0.7
CDC42SE1-204ENST00000483763 PDE8AO60658 829 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 ANAPC15P60006 121 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 BCL11BQ9C0K0 894 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 CEP126Q9P2H0 1117 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 NIP7Q9Y221 180 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 ZNF609O15014 1411 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 BTAF1O14981 1849 aa10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-204ENST00000483763 SNX14Q9Y5W7 946 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms