RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 DLEC1Q9Y238 1755 aa16.01■□□□□ 0.15
COMMD2-205ENST00000483708 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
COMMD2-205ENST00000483708 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
COMMD2-205ENST00000483708 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
COMMD2-205ENST00000483708 TNRC6CQ9HCJ0 1690 aaKnown RBP16■□□□□ 0.15
COMMD2-205ENST00000483708 F6X3S4 739 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 H7C1W4 665 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 GCKRQ14397 625 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 TMC4Q7Z404 712 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
COMMD2-205ENST00000483708 LINS1Q8NG48 757 aa16■□□□□ 0.15
COMMD2-205ENST00000483708 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
COMMD2-205ENST00000483708 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
COMMD2-205ENST00000483708 DPP8Q6V1X1 898 aaPredicted RBP15.99■□□□□ 0.15
COMMD2-205ENST00000483708 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
COMMD2-205ENST00000483708 MPNDQ8N594 471 aa15.99■□□□□ 0.15
COMMD2-205ENST00000483708 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
COMMD2-205ENST00000483708 JDP2Q8WYK2 163 aa15.99■□□□□ 0.15
COMMD2-205ENST00000483708 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
COMMD2-205ENST00000483708 CDHR2Q9BYE9 1310 aa15.98■□□□□ 0.15
COMMD2-205ENST00000483708 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
COMMD2-205ENST00000483708 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
COMMD2-205ENST00000483708 UBE3BQ7Z3V4 1068 aa15.98■□□□□ 0.15
COMMD2-205ENST00000483708 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
COMMD2-205ENST00000483708 SEC31BQ9NQW1 1179 aa15.98■□□□□ 0.15
COMMD2-205ENST00000483708 TOMM70O94826 608 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 DDNO94850 711 aaPredicted RBP15.97■□□□□ 0.15
COMMD2-205ENST00000483708 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
COMMD2-205ENST00000483708 VPS33BQ9H267 617 aa15.97■□□□□ 0.15
COMMD2-205ENST00000483708 CTSWP56202 376 aa15.96■□□□□ 0.15
COMMD2-205ENST00000483708 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
COMMD2-205ENST00000483708 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
COMMD2-205ENST00000483708 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
COMMD2-205ENST00000483708 FZD9O00144 591 aa15.95■□□□□ 0.14
COMMD2-205ENST00000483708 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
COMMD2-205ENST00000483708 CASP7P55210 303 aa15.95■□□□□ 0.14
COMMD2-205ENST00000483708 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
COMMD2-205ENST00000483708 CT47B1P0C2W7 299 aaPredicted RBP15.94■□□□□ 0.14
COMMD2-205ENST00000483708 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
COMMD2-205ENST00000483708 HNRNPUQ00839 825 aaKnown RBP eCLIP15.94■□□□□ 0.14
COMMD2-205ENST00000483708 AOC3Q16853 763 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 SRCIN1Q9C0H9 1055 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 GREM2Q9H772 168 aa15.94■□□□□ 0.14
COMMD2-205ENST00000483708 POTECB2RU33 542 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 ALDH1L1O75891 902 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 GPSM2P81274 684 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
COMMD2-205ENST00000483708 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
COMMD2-205ENST00000483708 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 C9orf78Q9NZ63 289 aaPredicted RBP15.93■□□□□ 0.14
COMMD2-205ENST00000483708 PTPRCP08575 1304 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 ZNF541Q9H0D2 1346 aa15.93■□□□□ 0.14
COMMD2-205ENST00000483708 ANKRD36CQ5JPF3 1778 aa15.92■□□□□ 0.14
COMMD2-205ENST00000483708 ARFGEF2Q9Y6D5 1785 aa15.92■□□□□ 0.14
COMMD2-205ENST00000483708 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
COMMD2-205ENST00000483708 GJA3Q9Y6H8 435 aa15.92■□□□□ 0.14
COMMD2-205ENST00000483708 GRM8O00222 908 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 CSF1RP07333 972 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 GPC2Q8N158 579 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 POLLQ9UGP5 575 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 ZNRF3Q9ULT6 936 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 CEP350Q5VT06 3117 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 FER1L6Q2WGJ9 1857 aa15.91■□□□□ 0.14
COMMD2-205ENST00000483708 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
COMMD2-205ENST00000483708 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
COMMD2-205ENST00000483708 TBC1D16Q8TBP0 767 aa15.9■□□□□ 0.14
COMMD2-205ENST00000483708 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
COMMD2-205ENST00000483708 EYA3Q99504 573 aa15.9■□□□□ 0.14
COMMD2-205ENST00000483708 BSDC1Q9NW68 430 aaPredicted RBP15.9■□□□□ 0.14
COMMD2-205ENST00000483708 PODXL2Q9NZ53 605 aa15.9■□□□□ 0.14
COMMD2-205ENST00000483708 SBF1O95248 1867 aa15.89■□□□□ 0.13
COMMD2-205ENST00000483708 ITGA6P23229 1130 aa15.89■□□□□ 0.13
COMMD2-205ENST00000483708 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
COMMD2-205ENST00000483708 FOXO4P98177 505 aa15.89■□□□□ 0.13
COMMD2-205ENST00000483708 FSTL1Q12841 308 aa15.89■□□□□ 0.13
COMMD2-205ENST00000483708 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
COMMD2-205ENST00000483708 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
COMMD2-205ENST00000483708 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 UFL1O94874 794 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 HSPA6P17066 643 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
COMMD2-205ENST00000483708 CXCL9Q07325 125 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 ZC3H12CQ9C0D7 883 aaKnown RBP15.88■□□□□ 0.13
COMMD2-205ENST00000483708 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
COMMD2-205ENST00000483708 CHMP3Q9Y3E7 222 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms