RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-212ENST00000482251 CELF1Q92879 486 aaKnown RBP13.48□□□□□ -0.25
CPSF4-212ENST00000482251 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-212ENST00000482251 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
CPSF4-212ENST00000482251 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-212ENST00000482251 HACL1Q9UJ83 578 aa13.48□□□□□ -0.25
CPSF4-212ENST00000482251 BBOX1O75936 387 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 IFFO2Q5TF58 517 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 G2E3Q7L622 706 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 GPC2Q8N158 579 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 MPNDQ8N594 471 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 DNAJC5GQ8N7S2 189 aa13.47□□□□□ -0.25
CPSF4-212ENST00000482251 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-212ENST00000482251 IL16Q14005 1332 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 ADAMTSL1Q8N6G6 1762 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 EPHX2P34913 555 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
CPSF4-212ENST00000482251 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-212ENST00000482251 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-212ENST00000482251 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
CPSF4-212ENST00000482251 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
CPSF4-212ENST00000482251 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SUPT20HQ8NEM7 779 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 KLRG1Q96E93 195 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 GPR101Q96P66 508 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
CPSF4-212ENST00000482251 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
CPSF4-212ENST00000482251 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-212ENST00000482251 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
CPSF4-212ENST00000482251 LMOD1P29536 600 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-212ENST00000482251 SCNN1DP51172 638 aa13.44□□□□□ -0.26
CPSF4-212ENST00000482251 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
CPSF4-212ENST00000482251 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
CPSF4-212ENST00000482251 CCDC191Q8NCU4 936 aa13.44□□□□□ -0.26
CPSF4-212ENST00000482251 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-212ENST00000482251 RAD17O75943 681 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 EPS15P42566 896 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 GPSM2P81274 684 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 KIAA2012Q0VF49 1180 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 FLIIQ13045 1269 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-212ENST00000482251 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
CPSF4-212ENST00000482251 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
CPSF4-212ENST00000482251 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 PDE8AO60658 829 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 CXCL9Q07325 125 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-212ENST00000482251 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 MYH3P11055 1940 aa13.42□□□□□ -0.26
CPSF4-212ENST00000482251 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 C6orf229H3BNL8 230 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-212ENST00000482251 CTSWP56202 376 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
CPSF4-212ENST00000482251 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
CPSF4-212ENST00000482251 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 PNMA8AQ86V59 439 aaPredicted RBP13.41□□□□□ -0.26
CPSF4-212ENST00000482251 DBNDD1Q9H9R9 158 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
CPSF4-212ENST00000482251 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 VAMP4O75379 141 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
CPSF4-212ENST00000482251 MKRN1Q9UHC7 482 aaKnown RBP13.4□□□□□ -0.26
CPSF4-212ENST00000482251 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 UFL1O94874 794 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
CPSF4-212ENST00000482251 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 MYH16Q9H6N6 1097 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
CPSF4-212ENST00000482251 PCNTO95613 3336 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 F6X3S4 739 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 ECE2O60344 883 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 ITGBL1O95965 494 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-212ENST00000482251 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPSF4-212ENST00000482251 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 GREM2Q9H772 168 aa13.38□□□□□ -0.27
CPSF4-212ENST00000482251 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-212ENST00000482251 GCKRQ14397 625 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms