RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
CCDC78-212ENST00000482152 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
CCDC78-212ENST00000482152 API5Q9BZZ5 524 aaKnown RBP20.69■□□□□ 0.9
CCDC78-212ENST00000482152 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
CCDC78-212ENST00000482152 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
CCDC78-212ENST00000482152 ZC3H4Q9UPT8 1303 aaKnown RBP20.69■□□□□ 0.9
CCDC78-212ENST00000482152 IPO8O15397 1037 aaKnown RBP20.68■□□□□ 0.9
CCDC78-212ENST00000482152 FKBP4Q02790 459 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCDC78-212ENST00000482152 PSMD1Q99460 953 aa20.68■□□□□ 0.9
CCDC78-212ENST00000482152 CASP7P55210 303 aa20.67■□□□□ 0.9
CCDC78-212ENST00000482152 CTSWP56202 376 aa20.67■□□□□ 0.9
CCDC78-212ENST00000482152 C9orf78Q9NZ63 289 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-212ENST00000482152 RNF181Q9P0P0 153 aa20.67■□□□□ 0.9
CCDC78-212ENST00000482152 NOB1Q9ULX3 412 aaKnown RBP20.67■□□□□ 0.9
CCDC78-212ENST00000482152 GRM8O00222 908 aa20.66■□□□□ 0.9
CCDC78-212ENST00000482152 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
CCDC78-212ENST00000482152 TTLL11Q8NHH1 800 aa20.66■□□□□ 0.9
CCDC78-212ENST00000482152 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
CCDC78-212ENST00000482152 VPS33BQ9H267 617 aa20.66■□□□□ 0.9
CCDC78-212ENST00000482152 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
CCDC78-212ENST00000482152 RTL9Q8NET4 1388 aa20.65■□□□□ 0.9
CCDC78-212ENST00000482152 RASSF7Q02833 373 aa20.65■□□□□ 0.9
CCDC78-212ENST00000482152 CSF1RP07333 972 aa20.64■□□□□ 0.89
CCDC78-212ENST00000482152 CCT4P50991 539 aaKnown RBP20.64■□□□□ 0.89
CCDC78-212ENST00000482152 ZNF784Q8NCA9 323 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-212ENST00000482152 SUPT20HQ8NEM7 779 aa20.64■□□□□ 0.89
CCDC78-212ENST00000482152 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
CCDC78-212ENST00000482152 LAMB2P55268 1798 aa20.64■□□□□ 0.89
CCDC78-212ENST00000482152 UTYO14607 1347 aa20.63■□□□□ 0.89
CCDC78-212ENST00000482152 ANKRD18AQ8IVF6 992 aa20.62■□□□□ 0.89
CCDC78-212ENST00000482152 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
CCDC78-212ENST00000482152 HDAC5Q9UQL6 1122 aa20.62■□□□□ 0.89
CCDC78-212ENST00000482152 FER1L6Q2WGJ9 1857 aa20.62■□□□□ 0.89
CCDC78-212ENST00000482152 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
CCDC78-212ENST00000482152 MPNDQ8N594 471 aa20.61■□□□□ 0.89
CCDC78-212ENST00000482152 RTFDC1Q9BY42 306 aaPredicted RBP20.61■□□□□ 0.89
CCDC78-212ENST00000482152 SNED1Q8TER0 1413 aa20.61■□□□□ 0.89
CCDC78-212ENST00000482152 PRELPP51888 382 aa20.6■□□□□ 0.89
CCDC78-212ENST00000482152 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
CCDC78-212ENST00000482152 SEC31BQ9NQW1 1179 aa20.6■□□□□ 0.89
CCDC78-212ENST00000482152 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
CCDC78-212ENST00000482152 BCAR3O75815 825 aa20.59■□□□□ 0.89
CCDC78-212ENST00000482152 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
CCDC78-212ENST00000482152 FOXO4P98177 505 aa20.59■□□□□ 0.89
CCDC78-212ENST00000482152 DPY19L2Q6NUT2 758 aa20.59■□□□□ 0.89
CCDC78-212ENST00000482152 GREM2Q9H772 168 aa20.59■□□□□ 0.89
CCDC78-212ENST00000482152 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
CCDC78-212ENST00000482152 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
CCDC78-212ENST00000482152 ZNF277Q9NRM2 450 aaPredicted RBP20.58■□□□□ 0.89
CCDC78-212ENST00000482152 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.89
CCDC78-212ENST00000482152 SBF1O95248 1867 aa20.58■□□□□ 0.88
CCDC78-212ENST00000482152 ANKRD18BA2A2Z9 1011 aa20.57■□□□□ 0.88
CCDC78-212ENST00000482152 ITGA6P23229 1130 aa20.57■□□□□ 0.88
CCDC78-212ENST00000482152 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
CCDC78-212ENST00000482152 IFIT5Q13325 482 aaKnown RBP20.57■□□□□ 0.88
CCDC78-212ENST00000482152 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
CCDC78-212ENST00000482152 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
CCDC78-212ENST00000482152 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
CCDC78-212ENST00000482152 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
CCDC78-212ENST00000482152 GPBP1L1Q9HC44 474 aaPredicted RBP20.57■□□□□ 0.88
CCDC78-212ENST00000482152 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
CCDC78-212ENST00000482152 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
CCDC78-212ENST00000482152 NBPF7P0C2Y1 421 aaPredicted RBP20.56■□□□□ 0.88
CCDC78-212ENST00000482152 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
CCDC78-212ENST00000482152 FRAT1Q92837 279 aaPredicted RBP20.56■□□□□ 0.88
CCDC78-212ENST00000482152 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
CCDC78-212ENST00000482152 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
CCDC78-212ENST00000482152 LMBR1LQ6UX01 489 aa20.55■□□□□ 0.88
CCDC78-212ENST00000482152 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
CCDC78-212ENST00000482152 TRIM27P14373 513 aa20.54■□□□□ 0.88
CCDC78-212ENST00000482152 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
CCDC78-212ENST00000482152 EYA3Q99504 573 aa20.54■□□□□ 0.88
CCDC78-212ENST00000482152 FZD9O00144 591 aa20.53■□□□□ 0.88
CCDC78-212ENST00000482152 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
CCDC78-212ENST00000482152 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-212ENST00000482152 SUCLG2Q96I99 432 aa20.53■□□□□ 0.88
CCDC78-212ENST00000482152 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
CCDC78-212ENST00000482152 MYH3P11055 1940 aa20.53■□□□□ 0.88
CCDC78-212ENST00000482152 PPIP5K2O43314 1243 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 GNAI3P08754 354 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 GPSM2P81274 684 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 KIAA2012Q0VF49 1180 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 ANKRD2Q9GZV1 360 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 CHMP3Q9Y3E7 222 aa20.52■□□□□ 0.88
CCDC78-212ENST00000482152 XDHP47989 1333 aa20.52■□□□□ 0.87
CCDC78-212ENST00000482152 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
CCDC78-212ENST00000482152 MS4A1P11836 297 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 ATP2B4P23634 1241 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 GGA1Q9UJY5 639 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 MINPP1Q9UNW1 487 aa20.51■□□□□ 0.87
CCDC78-212ENST00000482152 LRRC37AA6NMS7 1700 aa20.5■□□□□ 0.87
CCDC78-212ENST00000482152 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
CCDC78-212ENST00000482152 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
CCDC78-212ENST00000482152 TAF7LQ5H9L4 462 aa20.5■□□□□ 0.87
CCDC78-212ENST00000482152 TBC1D16Q8TBP0 767 aa20.5■□□□□ 0.87
CCDC78-212ENST00000482152 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms