RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PHF14O94880 888 aa19.13■□□□□ 0.65
RXRA-202ENST00000481739 DDIT3P35638 169 aa19.13■□□□□ 0.65
RXRA-202ENST00000481739 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
RXRA-202ENST00000481739 FAM89AQ96GI7 184 aa19.13■□□□□ 0.65
RXRA-202ENST00000481739 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
RXRA-202ENST00000481739 ZPR1O75312 459 aa19.12■□□□□ 0.65
RXRA-202ENST00000481739 PCCAP05165 728 aaPredicted RBP19.12■□□□□ 0.65
RXRA-202ENST00000481739 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
RXRA-202ENST00000481739 MCM2P49736 904 aa19.12■□□□□ 0.65
RXRA-202ENST00000481739 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
RXRA-202ENST00000481739 ZBTB38Q8NAP3 1195 aaPredicted RBP19.12■□□□□ 0.65
RXRA-202ENST00000481739 ANO2Q9NQ90 1003 aa19.12■□□□□ 0.65
RXRA-202ENST00000481739 AK9Q5TCS8 1911 aa19.12■□□□□ 0.65
RXRA-202ENST00000481739 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 SGSM2O43147 1006 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 NIP7Q9Y221 180 aaKnown RBP eCLIP19.11■□□□□ 0.65
RXRA-202ENST00000481739 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 PLSCR1O15162 318 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 TRAPPC3LQ5T215 181 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 EAF2Q96CJ1 260 aaPredicted RBP19.11■□□□□ 0.65
RXRA-202ENST00000481739 UBN2Q6ZU65 1347 aa19.11■□□□□ 0.65
RXRA-202ENST00000481739 BCORQ6W2J9 1755 aa19.1■□□□□ 0.65
RXRA-202ENST00000481739 HMGB2P26583 209 aaKnown RBP19.1■□□□□ 0.65
RXRA-202ENST00000481739 USPL1Q5W0Q7 1092 aa19.1■□□□□ 0.65
RXRA-202ENST00000481739 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
RXRA-202ENST00000481739 PROM2Q8N271 834 aa19.1■□□□□ 0.65
RXRA-202ENST00000481739 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
RXRA-202ENST00000481739 NARFQ9UHQ1 456 aa19.1■□□□□ 0.65
RXRA-202ENST00000481739 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
RXRA-202ENST00000481739 RFC4P35249 363 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 FOXO4P98177 505 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 CLEC4GQ6UXB4 293 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 AMIGO3Q86WK7 504 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 SRP68Q9UHB9 627 aaKnown RBP19.09■□□□□ 0.65
RXRA-202ENST00000481739 PARP10Q53GL7 1025 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
RXRA-202ENST00000481739 SIL1Q9H173 461 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 RAD50Q92878 1312 aa19.09■□□□□ 0.65
RXRA-202ENST00000481739 CD2BP2O95400 341 aaKnown RBP19.08■□□□□ 0.64
RXRA-202ENST00000481739 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
RXRA-202ENST00000481739 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
RXRA-202ENST00000481739 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.64
RXRA-202ENST00000481739 SYNE4Q8N205 404 aa19.08■□□□□ 0.64
RXRA-202ENST00000481739 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
RXRA-202ENST00000481739 TNS1Q9HBL0 1735 aaKnown RBP19.08■□□□□ 0.64
RXRA-202ENST00000481739 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 RFX7Q2KHR2 1363 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 IRS4O14654 1257 aaPredicted RBP19.07■□□□□ 0.64
RXRA-202ENST00000481739 HSPA4P34932 840 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 TNNI3KQ59H18 835 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 FPGT-TNNI3KV9GXZ4 949 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 CDHR2Q9BYE9 1310 aa19.07■□□□□ 0.64
RXRA-202ENST00000481739 SCN7AQ01118 1682 aa19.06■□□□□ 0.64
RXRA-202ENST00000481739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
RXRA-202ENST00000481739 CIAO1O76071 339 aa19.06■□□□□ 0.64
RXRA-202ENST00000481739 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
RXRA-202ENST00000481739 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
RXRA-202ENST00000481739 CWC22Q9HCG8 908 aaKnown RBP19.06■□□□□ 0.64
RXRA-202ENST00000481739 ADRA2BP18089 450 aa19.05■□□□□ 0.64
RXRA-202ENST00000481739 ATP5JP18859 108 aa19.05■□□□□ 0.64
RXRA-202ENST00000481739 BCL2L12Q9HB09 334 aa19.05■□□□□ 0.64
RXRA-202ENST00000481739 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
RXRA-202ENST00000481739 SH3TC1Q8TE82 1336 aa19.05■□□□□ 0.64
RXRA-202ENST00000481739 RGL2O15211 777 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 MAP4K4O95819 1239 aaPredicted RBP19.04■□□□□ 0.64
RXRA-202ENST00000481739 TBC1D9BQ66K14 1250 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 CCDC85AQ96PX6 553 aaPredicted RBP19.04■□□□□ 0.64
RXRA-202ENST00000481739 CCDC8Q9H0W5 538 aaPredicted RBP19.04■□□□□ 0.64
RXRA-202ENST00000481739 C4AP0C0L4 1744 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 SSFA2P28290 1259 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 SETDB2Q96T68 719 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 SNRKQ9NRH2 765 aa19.04■□□□□ 0.64
RXRA-202ENST00000481739 TFCP2Q12800 502 aa19.03■□□□□ 0.64
RXRA-202ENST00000481739 LSG1Q9H089 658 aaKnown RBP19.03■□□□□ 0.64
RXRA-202ENST00000481739 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
RXRA-202ENST00000481739 PDE8AO60658 829 aa19.02■□□□□ 0.64
RXRA-202ENST00000481739 PTMSP20962 102 aa19.02■□□□□ 0.64
RXRA-202ENST00000481739 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
RXRA-202ENST00000481739 RAB3GAP1Q15042 981 aa19.02■□□□□ 0.64
RXRA-202ENST00000481739 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
RXRA-202ENST00000481739 CWC27Q6UX04 472 aaKnown RBP19.02■□□□□ 0.64
RXRA-202ENST00000481739 DDX11L8A8MPP1 907 aa19.02■□□□□ 0.63
RXRA-202ENST00000481739 EYA2O00167 538 aa19.02■□□□□ 0.63
RXRA-202ENST00000481739 NTSR2O95665 410 aa19.02■□□□□ 0.63
RXRA-202ENST00000481739 HCLS1P14317 486 aaPredicted RBP19.02■□□□□ 0.63
RXRA-202ENST00000481739 GTF2E1P29083 439 aaPredicted RBP19.02■□□□□ 0.63
RXRA-202ENST00000481739 DEKP35659 375 aaKnown RBP19.02■□□□□ 0.63
RXRA-202ENST00000481739 TLR7Q9NYK1 1049 aaKnown RBP19.02■□□□□ 0.63
RXRA-202ENST00000481739 DBNLQ9UJU6 430 aaKnown RBP19.02■□□□□ 0.63
RXRA-202ENST00000481739 MYH3P11055 1940 aa19.01■□□□□ 0.63
RXRA-202ENST00000481739 NEK4P51957 841 aa19.01■□□□□ 0.63
RXRA-202ENST00000481739 CTSWP56202 376 aa19.01■□□□□ 0.63
RXRA-202ENST00000481739 EN1Q05925 392 aaPredicted RBP19.01■□□□□ 0.63
RXRA-202ENST00000481739 CSF1RP07333 972 aa19■□□□□ 0.63
RXRA-202ENST00000481739 HSP90B1P14625 803 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms