RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
CLK1-211ENST00000481641 EPS15P42566 896 aa23.99■■□□□ 1.43
CLK1-211ENST00000481641 TRIM28Q13263 835 aaKnown RBP23.99■■□□□ 1.43
CLK1-211ENST00000481641 PASKQ96RG2 1323 aa23.99■■□□□ 1.43
CLK1-211ENST00000481641 COL4A1P02462 1669 aa23.99■■□□□ 1.43
CLK1-211ENST00000481641 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
CLK1-211ENST00000481641 IRS4O14654 1257 aaPredicted RBP23.98■■□□□ 1.43
CLK1-211ENST00000481641 ITGBL1O95965 494 aaPredicted RBP23.98■■□□□ 1.43
CLK1-211ENST00000481641 SCNN1DP51172 638 aa23.98■■□□□ 1.43
CLK1-211ENST00000481641 SF3B3Q15393 1217 aaKnown RBP23.98■■□□□ 1.43
CLK1-211ENST00000481641 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
CLK1-211ENST00000481641 MAP1SQ66K74 1059 aaPredicted RBP23.98■■□□□ 1.43
CLK1-211ENST00000481641 SUPT20HQ8NEM7 779 aa23.98■■□□□ 1.43
CLK1-211ENST00000481641 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
CLK1-211ENST00000481641 MRS2Q9HD23 443 aa23.98■■□□□ 1.43
CLK1-211ENST00000481641 PNMA8AQ86V59 439 aaPredicted RBP23.97■■□□□ 1.43
CLK1-211ENST00000481641 WWC1Q8IX03 1113 aa23.97■■□□□ 1.43
CLK1-211ENST00000481641 JARID2Q92833 1246 aaPredicted RBP23.97■■□□□ 1.43
CLK1-211ENST00000481641 CREBZFQ9NS37 354 aa23.97■■□□□ 1.43
CLK1-211ENST00000481641 MKRN1Q9UHC7 482 aaKnown RBP23.97■■□□□ 1.43
CLK1-211ENST00000481641 LMOD1P29536 600 aaPredicted RBP23.96■■□□□ 1.43
CLK1-211ENST00000481641 CCDC30Q5VVM6 783 aa23.96■■□□□ 1.43
CLK1-211ENST00000481641 VPS33BQ9H267 617 aa23.96■■□□□ 1.43
CLK1-211ENST00000481641 CXCL9Q07325 125 aa23.95■■□□□ 1.42
CLK1-211ENST00000481641 CCDC27Q2M243 656 aa23.95■■□□□ 1.42
CLK1-211ENST00000481641 CNTROBQ8N137 903 aa23.95■■□□□ 1.42
CLK1-211ENST00000481641 ZNRF3Q9ULT6 936 aa23.95■■□□□ 1.42
CLK1-211ENST00000481641 ANP32CO43423 234 aa23.94■■□□□ 1.42
CLK1-211ENST00000481641 KIAA2012Q0VF49 1180 aa23.94■■□□□ 1.42
CLK1-211ENST00000481641 ZBTB38Q8NAP3 1195 aaPredicted RBP23.94■■□□□ 1.42
CLK1-211ENST00000481641 SALL2Q9Y467 1007 aaPredicted RBP23.94■■□□□ 1.42
CLK1-211ENST00000481641 DUOX1Q9NRD9 1551 aa23.94■■□□□ 1.42
CLK1-211ENST00000481641 METTL22Q9BUU2 404 aaPredicted RBP23.93■■□□□ 1.42
CLK1-211ENST00000481641 RAD17O75943 681 aa23.92■■□□□ 1.42
CLK1-211ENST00000481641 TMC4Q7Z404 712 aa23.92■■□□□ 1.42
CLK1-211ENST00000481641 NSFL1CQ9UNZ2 370 aaKnown RBP23.92■■□□□ 1.42
CLK1-211ENST00000481641 MAP3K2Q9Y2U5 619 aa23.92■■□□□ 1.42
CLK1-211ENST00000481641 LRRC37AA6NMS7 1700 aa23.92■■□□□ 1.42
CLK1-211ENST00000481641 GPSM2P81274 684 aa23.91■■□□□ 1.42
CLK1-211ENST00000481641 CCDC191Q8NCU4 936 aa23.91■■□□□ 1.42
CLK1-211ENST00000481641 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
CLK1-211ENST00000481641 TMEM88BA6NKF7 163 aa23.9■■□□□ 1.42
CLK1-211ENST00000481641 YDJCA8MPS7 323 aa23.9■■□□□ 1.42
CLK1-211ENST00000481641 DDX58O95786 925 aaKnown RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 PCCAP05165 728 aaPredicted RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 GMPSP49915 693 aaPredicted RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 FMR1Q06787 632 aaKnown RBP eCLIP23.9■■□□□ 1.42
CLK1-211ENST00000481641 TWISTNBQ3B726 338 aaPredicted RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 CCDC85AQ96PX6 553 aaPredicted RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 CWC25Q9NXE8 425 aaPredicted RBP23.9■■□□□ 1.42
CLK1-211ENST00000481641 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 RIMBP2O15034 1052 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 HSPA1AP0DMV8 641 aaKnown RBP23.89■■□□□ 1.41
CLK1-211ENST00000481641 HSPA1BP0DMV9 641 aaKnown RBP23.89■■□□□ 1.41
CLK1-211ENST00000481641 RPS8P62241 208 aaKnown RBP23.89■■□□□ 1.41
CLK1-211ENST00000481641 CIAPIN1Q6FI81 312 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 G2E3Q7L622 706 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 GPR101Q96P66 508 aaPredicted RBP23.89■■□□□ 1.41
CLK1-211ENST00000481641 GPRC5DQ9NZD1 345 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 POLLQ9UGP5 575 aa23.89■■□□□ 1.41
CLK1-211ENST00000481641 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
CLK1-211ENST00000481641 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
CLK1-211ENST00000481641 KSR2Q6VAB6 950 aa23.88■■□□□ 1.41
CLK1-211ENST00000481641 STK31Q9BXU1 1019 aa23.88■■□□□ 1.41
CLK1-211ENST00000481641 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
CLK1-211ENST00000481641 CNTNAP1P78357 1384 aa23.88■■□□□ 1.41
CLK1-211ENST00000481641 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
CLK1-211ENST00000481641 WASHC4Q2M389 1173 aa23.87■■□□□ 1.41
CLK1-211ENST00000481641 USP50Q70EL3 339 aaPredicted RBP23.87■■□□□ 1.41
CLK1-211ENST00000481641 DBNDD1Q9H9R9 158 aa23.87■■□□□ 1.41
CLK1-211ENST00000481641 IL16Q14005 1332 aa23.86■■□□□ 1.41
CLK1-211ENST00000481641 PDE8AO60658 829 aa23.86■■□□□ 1.41
CLK1-211ENST00000481641 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
CLK1-211ENST00000481641 ADARB2Q9NS39 739 aaKnown RBP23.86■■□□□ 1.41
CLK1-211ENST00000481641 SHTN1A0MZ66 631 aa23.85■■□□□ 1.41
CLK1-211ENST00000481641 SLC4A2P04920 1241 aa23.85■■□□□ 1.41
CLK1-211ENST00000481641 TNIP1Q15025 636 aa23.85■■□□□ 1.41
CLK1-211ENST00000481641 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 TRAF5O00463 557 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 VEGFBP49765 207 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 DOK7Q18PE1 504 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 CWF19L2Q2TBE0 894 aaKnown RBP23.84■■□□□ 1.41
CLK1-211ENST00000481641 CCDC152Q4G0S7 254 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 TBC1D16Q8TBP0 767 aa23.84■■□□□ 1.41
CLK1-211ENST00000481641 HSP90B1P14625 803 aaKnown RBP23.83■■□□□ 1.41
CLK1-211ENST00000481641 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
CLK1-211ENST00000481641 KCNQ5Q9NR82 932 aa23.83■■□□□ 1.41
CLK1-211ENST00000481641 ZBTB12Q9Y330 459 aaPredicted RBP23.83■■□□□ 1.41
CLK1-211ENST00000481641 PSMD14O00487 310 aa23.82■■□□□ 1.4
CLK1-211ENST00000481641 HIRAP54198 1017 aaPredicted RBP23.81■■□□□ 1.4
CLK1-211ENST00000481641 NEXNQ0ZGT2 675 aa23.81■■□□□ 1.4
CLK1-211ENST00000481641 FAM9BQ8IZU0 186 aa23.81■■□□□ 1.4
CLK1-211ENST00000481641 TRPM4Q8TD43 1214 aa23.81■■□□□ 1.4
CLK1-211ENST00000481641 SPINK5Q9NQ38 1064 aaPredicted RBP23.81■■□□□ 1.4
CLK1-211ENST00000481641 CNOT7Q9UIV1 285 aaKnown RBP23.81■■□□□ 1.4
CLK1-211ENST00000481641 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
CLK1-211ENST00000481641 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
CLK1-211ENST00000481641 ECE2O60344 883 aa23.8■■□□□ 1.4
CLK1-211ENST00000481641 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms