RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
HDAC1-207ENST00000481281 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
HDAC1-207ENST00000481281 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-207ENST00000481281 COL4A5P29400 1685 aa16.68■□□□□ 0.26
HDAC1-207ENST00000481281 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
HDAC1-207ENST00000481281 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
HDAC1-207ENST00000481281 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
HDAC1-207ENST00000481281 MIER1Q8N108 512 aa16.67■□□□□ 0.26
HDAC1-207ENST00000481281 DNAAF4Q8WXU2 420 aa16.67■□□□□ 0.26
HDAC1-207ENST00000481281 DUOX1Q9NRD9 1551 aa16.67■□□□□ 0.26
HDAC1-207ENST00000481281 LTBP1Q14766 1721 aa16.66■□□□□ 0.26
HDAC1-207ENST00000481281 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
HDAC1-207ENST00000481281 PDE8AO60658 829 aa16.65■□□□□ 0.26
HDAC1-207ENST00000481281 TOMM70O94826 608 aa16.65■□□□□ 0.26
HDAC1-207ENST00000481281 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
HDAC1-207ENST00000481281 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
HDAC1-207ENST00000481281 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
HDAC1-207ENST00000481281 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
HDAC1-207ENST00000481281 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
HDAC1-207ENST00000481281 TMX4Q9H1E5 349 aaPredicted RBP16.65■□□□□ 0.26
HDAC1-207ENST00000481281 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
HDAC1-207ENST00000481281 GCKRQ14397 625 aa16.64■□□□□ 0.25
HDAC1-207ENST00000481281 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
HDAC1-207ENST00000481281 POTECB2RU33 542 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 H7C1W4 665 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 FZD9O00144 591 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
HDAC1-207ENST00000481281 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 SCN4AP35499 1836 aa16.63■□□□□ 0.25
HDAC1-207ENST00000481281 F6X3S4 739 aa16.62■□□□□ 0.25
HDAC1-207ENST00000481281 DDNO94850 711 aaPredicted RBP16.62■□□□□ 0.25
HDAC1-207ENST00000481281 CTSWP56202 376 aa16.62■□□□□ 0.25
HDAC1-207ENST00000481281 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
HDAC1-207ENST00000481281 DPP8Q6V1X1 898 aaPredicted RBP16.62■□□□□ 0.25
HDAC1-207ENST00000481281 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
HDAC1-207ENST00000481281 RBM46Q8TBY0 533 aaKnown RBP16.62■□□□□ 0.25
HDAC1-207ENST00000481281 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
HDAC1-207ENST00000481281 CASP7P55210 303 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 RPS8P62241 208 aaKnown RBP16.61■□□□□ 0.25
HDAC1-207ENST00000481281 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
HDAC1-207ENST00000481281 MPNDQ8N594 471 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 L3MBTL3Q96JM7 780 aaPredicted RBP16.61■□□□□ 0.25
HDAC1-207ENST00000481281 SEC31BQ9NQW1 1179 aa16.61■□□□□ 0.25
HDAC1-207ENST00000481281 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
HDAC1-207ENST00000481281 LARGE2Q8N3Y3 721 aa16.6■□□□□ 0.25
HDAC1-207ENST00000481281 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
HDAC1-207ENST00000481281 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
HDAC1-207ENST00000481281 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
HDAC1-207ENST00000481281 SPEF2Q9C093 1822 aa16.6■□□□□ 0.25
HDAC1-207ENST00000481281 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
HDAC1-207ENST00000481281 AOC3Q16853 763 aa16.59■□□□□ 0.25
HDAC1-207ENST00000481281 CT47B1P0C2W7 299 aaPredicted RBP16.58■□□□□ 0.24
HDAC1-207ENST00000481281 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
HDAC1-207ENST00000481281 GPC2Q8N158 579 aa16.58■□□□□ 0.24
HDAC1-207ENST00000481281 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.24
HDAC1-207ENST00000481281 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
HDAC1-207ENST00000481281 PTPRCP08575 1304 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 HSPA6P17066 643 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 GPSM2P81274 684 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 FSTL1Q12841 308 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 GREM2Q9H772 168 aa16.57■□□□□ 0.24
HDAC1-207ENST00000481281 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
HDAC1-207ENST00000481281 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
HDAC1-207ENST00000481281 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
HDAC1-207ENST00000481281 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
HDAC1-207ENST00000481281 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
HDAC1-207ENST00000481281 CDC5LQ99459 802 aaKnown RBP16.56■□□□□ 0.24
HDAC1-207ENST00000481281 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
HDAC1-207ENST00000481281 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
HDAC1-207ENST00000481281 CSF1RP07333 972 aa16.55■□□□□ 0.24
HDAC1-207ENST00000481281 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
HDAC1-207ENST00000481281 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
HDAC1-207ENST00000481281 POLLQ9UGP5 575 aa16.55■□□□□ 0.24
HDAC1-207ENST00000481281 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
HDAC1-207ENST00000481281 GRM8O00222 908 aa16.54■□□□□ 0.24
HDAC1-207ENST00000481281 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
HDAC1-207ENST00000481281 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
HDAC1-207ENST00000481281 TBC1D16Q8TBP0 767 aa16.54■□□□□ 0.24
HDAC1-207ENST00000481281 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
HDAC1-207ENST00000481281 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
HDAC1-207ENST00000481281 FOXO4P98177 505 aa16.53■□□□□ 0.24
HDAC1-207ENST00000481281 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
HDAC1-207ENST00000481281 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
HDAC1-207ENST00000481281 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-207ENST00000481281 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
HDAC1-207ENST00000481281 A0A1B0GUL6 1792 aa16.53■□□□□ 0.24
HDAC1-207ENST00000481281 UTYO14607 1347 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 XDHP47989 1333 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 ITGA6P23229 1130 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 SCNN1DP51172 638 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 CXCL9Q07325 125 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 EYA3Q99504 573 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
HDAC1-207ENST00000481281 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms