RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 POTECB2RU33 542 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 ELL2O00472 640 aaPredicted RBP14.67□□□□□ -0.06
CCM2-213ENST00000480658 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
CCM2-213ENST00000480658 EPHX2P34913 555 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 KSR2Q6VAB6 950 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 KLRG1Q96E93 195 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 FAM89AQ96GI7 184 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 EYA3Q99504 573 aa14.67□□□□□ -0.06
CCM2-213ENST00000480658 ZNF541Q9H0D2 1346 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 ATP5J2-PTCD1G3V325 749 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 KIAA2012Q0VF49 1180 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 TNIP1Q15025 636 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 MYD88Q99836 296 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
CCM2-213ENST00000480658 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 ZNRF3Q9ULT6 936 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
CCM2-213ENST00000480658 PDE8AO60658 829 aa14.65□□□□□ -0.06
CCM2-213ENST00000480658 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
CCM2-213ENST00000480658 TCERG1O14776 1098 aaKnown RBP14.64□□□□□ -0.07
CCM2-213ENST00000480658 CCDC184Q52MB2 194 aa14.64□□□□□ -0.07
CCM2-213ENST00000480658 EAPPQ56P03 285 aaPredicted RBP14.64□□□□□ -0.07
CCM2-213ENST00000480658 USP50Q70EL3 339 aaPredicted RBP14.64□□□□□ -0.07
CCM2-213ENST00000480658 DNAJC5GQ8N7S2 189 aa14.64□□□□□ -0.07
CCM2-213ENST00000480658 MAP3K2Q9Y2U5 619 aa14.64□□□□□ -0.07
CCM2-213ENST00000480658 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
CCM2-213ENST00000480658 RPS8P62241 208 aaKnown RBP14.63□□□□□ -0.07
CCM2-213ENST00000480658 AOC3Q16853 763 aa14.63□□□□□ -0.07
CCM2-213ENST00000480658 JMYQ8N9B5 988 aa14.63□□□□□ -0.07
CCM2-213ENST00000480658 CDC5LQ99459 802 aaKnown RBP14.63□□□□□ -0.07
CCM2-213ENST00000480658 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
CCM2-213ENST00000480658 GJA3Q9Y6H8 435 aa14.63□□□□□ -0.07
CCM2-213ENST00000480658 ADAMTSL1Q8N6G6 1762 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 RTL9Q8NET4 1388 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 CACNA1FO60840 1977 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 PI4KAP2A4QPH2 592 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 FLIIQ13045 1269 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 TSPYL6Q8N831 410 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 PI4KAP1Q8N8J0 262 aa14.62□□□□□ -0.07
CCM2-213ENST00000480658 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
CCM2-213ENST00000480658 FKBP5Q13451 457 aaPredicted RBP14.61□□□□□ -0.07
CCM2-213ENST00000480658 CIAPIN1Q6FI81 312 aa14.61□□□□□ -0.07
CCM2-213ENST00000480658 ANKRD18AQ8IVF6 992 aa14.61□□□□□ -0.07
CCM2-213ENST00000480658 ADARB2Q9NS39 739 aaKnown RBP14.61□□□□□ -0.07
CCM2-213ENST00000480658 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
CCM2-213ENST00000480658 RPS12P25398 132 aaKnown RBP14.6□□□□□ -0.07
CCM2-213ENST00000480658 FAM9BQ8IZU0 186 aa14.6□□□□□ -0.07
CCM2-213ENST00000480658 PASKQ96RG2 1323 aa14.6□□□□□ -0.07
CCM2-213ENST00000480658 DUOX1Q9NRD9 1551 aa14.6□□□□□ -0.07
CCM2-213ENST00000480658 COL4A5P29400 1685 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 TMEM88BA6NKF7 163 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 G3V3G9 751 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 SCNN1DP51172 638 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 CTSWP56202 376 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
CCM2-213ENST00000480658 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 ZC3H15Q8WU90 426 aaKnown RBP14.59□□□□□ -0.07
CCM2-213ENST00000480658 DNAAF4Q8WXU2 420 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 CELF1Q92879 486 aaKnown RBP14.59□□□□□ -0.07
CCM2-213ENST00000480658 ZNF428Q96B54 188 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 BCL2L13Q9BXK5 485 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
CCM2-213ENST00000480658 GPRC5DQ9NZD1 345 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 ANKIB1Q9P2G1 1089 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 XDHP47989 1333 aa14.59□□□□□ -0.07
CCM2-213ENST00000480658 NEURL1BA8MQ27 555 aa14.58□□□□□ -0.08
CCM2-213ENST00000480658 CXCL9Q07325 125 aa14.58□□□□□ -0.08
CCM2-213ENST00000480658 DPF2Q92785 391 aa14.58□□□□□ -0.08
CCM2-213ENST00000480658 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
CCM2-213ENST00000480658 LTBP1Q14766 1721 aa14.58□□□□□ -0.08
CCM2-213ENST00000480658 VAMP4O75379 141 aa14.57□□□□□ -0.08
CCM2-213ENST00000480658 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
CCM2-213ENST00000480658 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
CCM2-213ENST00000480658 PLA2G12BQ9BX93 195 aa14.57□□□□□ -0.08
CCM2-213ENST00000480658 ZNF609O15014 1411 aa14.57□□□□□ -0.08
CCM2-213ENST00000480658 H7C1D1 291 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
CCM2-213ENST00000480658 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 IGHMBP2P38935 993 aaKnown RBP14.56□□□□□ -0.08
CCM2-213ENST00000480658 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
CCM2-213ENST00000480658 GCKRQ14397 625 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 TBC1D16Q8TBP0 767 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 BSDC1Q9NW68 430 aaPredicted RBP14.56□□□□□ -0.08
CCM2-213ENST00000480658 MYH3P11055 1940 aa14.56□□□□□ -0.08
CCM2-213ENST00000480658 E9PSI1 815 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 H7C1W4 665 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 UFL1O94874 794 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 MMP14P50281 582 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 GPSM2P81274 684 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 UBE3BQ7Z3V4 1068 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
CCM2-213ENST00000480658 CNTNAP1P78357 1384 aa14.55□□□□□ -0.08
CCM2-213ENST00000480658 ECE2O60344 883 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms