RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
LINC00173-203ENST00000480237 FAM196AQ6ZSG2 479 aa12.97□□□□□ -0.33
LINC00173-203ENST00000480237 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
LINC00173-203ENST00000480237 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
LINC00173-203ENST00000480237 ARAP2Q8WZ64 1704 aa12.97□□□□□ -0.33
LINC00173-203ENST00000480237 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
LINC00173-203ENST00000480237 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
LINC00173-203ENST00000480237 APBB1O00213 710 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
LINC00173-203ENST00000480237 PPP1R42Q7Z4L9 355 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
LINC00173-203ENST00000480237 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 SUCLG2Q96I99 432 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
LINC00173-203ENST00000480237 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
LINC00173-203ENST00000480237 A0A087WZG4 1122 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 PPP1R37O75864 691 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 PDE4AP27815 886 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 RXRBP28702 533 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
LINC00173-203ENST00000480237 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
LINC00173-203ENST00000480237 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
LINC00173-203ENST00000480237 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
LINC00173-203ENST00000480237 KCNQ4P56696 695 aa12.93□□□□□ -0.34
LINC00173-203ENST00000480237 MTX1Q13505 466 aa12.93□□□□□ -0.34
LINC00173-203ENST00000480237 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
LINC00173-203ENST00000480237 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
LINC00173-203ENST00000480237 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
LINC00173-203ENST00000480237 HLFQ16534 295 aa12.92□□□□□ -0.34
LINC00173-203ENST00000480237 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
LINC00173-203ENST00000480237 SURF6O75683 361 aaKnown RBP12.91□□□□□ -0.34
LINC00173-203ENST00000480237 TRIM37O94972 964 aa12.91□□□□□ -0.34
LINC00173-203ENST00000480237 GPTP24298 496 aa12.91□□□□□ -0.34
LINC00173-203ENST00000480237 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
LINC00173-203ENST00000480237 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
LINC00173-203ENST00000480237 KAZALD1Q96I82 304 aa12.91□□□□□ -0.34
LINC00173-203ENST00000480237 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
LINC00173-203ENST00000480237 CASP7P55210 303 aa12.9□□□□□ -0.34
LINC00173-203ENST00000480237 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
LINC00173-203ENST00000480237 RTL5Q5HYW3 569 aaPredicted RBP12.9□□□□□ -0.34
LINC00173-203ENST00000480237 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
LINC00173-203ENST00000480237 TNRC6CQ9HCJ0 1690 aaKnown RBP12.9□□□□□ -0.34
LINC00173-203ENST00000480237 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
LINC00173-203ENST00000480237 H7C1W4 665 aa12.9□□□□□ -0.35
LINC00173-203ENST00000480237 GNPATO15228 680 aa12.9□□□□□ -0.35
LINC00173-203ENST00000480237 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.35
LINC00173-203ENST00000480237 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.35
LINC00173-203ENST00000480237 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.35
LINC00173-203ENST00000480237 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.35
LINC00173-203ENST00000480237 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.35
LINC00173-203ENST00000480237 LRP5O75197 1615 aa12.89□□□□□ -0.35
LINC00173-203ENST00000480237 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
LINC00173-203ENST00000480237 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
LINC00173-203ENST00000480237 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
LINC00173-203ENST00000480237 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
LINC00173-203ENST00000480237 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
LINC00173-203ENST00000480237 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
LINC00173-203ENST00000480237 AK7Q96M32 723 aa12.88□□□□□ -0.35
LINC00173-203ENST00000480237 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
LINC00173-203ENST00000480237 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
LINC00173-203ENST00000480237 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
LINC00173-203ENST00000480237 G3V3G9 751 aa12.87□□□□□ -0.35
LINC00173-203ENST00000480237 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
LINC00173-203ENST00000480237 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
LINC00173-203ENST00000480237 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
LINC00173-203ENST00000480237 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
LINC00173-203ENST00000480237 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
LINC00173-203ENST00000480237 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
LINC00173-203ENST00000480237 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
LINC00173-203ENST00000480237 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
LINC00173-203ENST00000480237 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
LINC00173-203ENST00000480237 RPS6KA4O75676 772 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
LINC00173-203ENST00000480237 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
LINC00173-203ENST00000480237 CHD4Q14839 1912 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 NRXN2Q9P2S2 1712 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 FOXO4P98177 505 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00173-203ENST00000480237 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 RHPN1Q8TCX5 695 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 SIL1Q9H173 461 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
LINC00173-203ENST00000480237 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
LINC00173-203ENST00000480237 DOCK2Q92608 1830 aa12.85□□□□□ -0.35
LINC00173-203ENST00000480237 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
LINC00173-203ENST00000480237 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms