RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 CCDC102AQ96A19 550 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 GCNAQ96QF7 691 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 SIN3AQ96ST3 1273 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 CCDC125Q86Z20 511 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 ATP2A3Q93084 1043 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 RAB3IPQ96QF0 476 aaPredicted RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 SERTAD1Q9UHV2 236 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 DPYSL4O14531 572 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 FOXD4Q12950 439 aaPredicted RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 TBC1D5Q92609 795 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 SUDS3Q9H7L9 328 aaPredicted RBP10.21□□□□□ -0.78
TTC3-216ENST00000479930 CDKL5O76039 1030 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 SLC5A1P13866 664 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 GPTP24298 496 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 ZNF75DP51815 510 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 HACE1Q8IYU2 909 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 SLITRK6Q9H5Y7 841 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 SUPT3HB4E1H0 165 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 E7EVH7 732 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 ZKSCAN2Q63HK3 967 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 CTCFLQ8NI51 663 aaPredicted RBP10.2□□□□□ -0.78
TTC3-216ENST00000479930 NUCKS1Q9H1E3 243 aaKnown RBP10.2□□□□□ -0.78
TTC3-216ENST00000479930 CLNS1AP54105 237 aaKnown RBP10.2□□□□□ -0.78
TTC3-216ENST00000479930 FAM114A1Q8IWE2 563 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 WASF1Q92558 559 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 KRT13P13646 458 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 CALML4Q96GE6 196 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 KLHL10Q6JEL2 608 aa10.2□□□□□ -0.78
TTC3-216ENST00000479930 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
TTC3-216ENST00000479930 BAG3O95817 575 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 PSMD6Q15008 389 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 YAF2Q8IY57 180 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 SPC24Q8NBT2 197 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 PAGR1Q9BTK6 254 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.19□□□□□ -0.78
TTC3-216ENST00000479930 IDEP14735 1019 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 INPP1P49441 399 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 ARL4DP49703 201 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 ZNF165P49910 485 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 KIAA1841Q6NSI8 718 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 MSANTD4Q8NCY6 345 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 MTRQ99707 1265 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 PPANQ9NQ55 473 aaKnown RBP10.19□□□□□ -0.78
TTC3-216ENST00000479930 DOLKQ9UPQ8 538 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 AFAP1L1Q8TED9 768 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 TTC22Q5TAA0 569 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 CARMIL2Q6F5E8 1435 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 ATICP31939 592 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 GADL1Q6ZQY3 521 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 DDX11Q96FC9 970 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 SMC6Q96SB8 1091 aa10.19□□□□□ -0.78
TTC3-216ENST00000479930 IL1RL1Q01638 556 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 USP37Q86T82 979 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 TNPO1Q92973 898 aaKnown RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 THEMISQ8N1K5 641 aaPredicted RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 KAT14Q9H8E8 782 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 RAB3GAP2Q9H2M9 1393 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 BTBD11A6QL63 1104 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 LDHCP07864 332 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 ZNF18P17022 549 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 PRKCQQ04759 706 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 SARNPP82979 210 aaKnown RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 NR1H4Q96RI1 486 aaPredicted RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 ARID4AP29374 1257 aaPredicted RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 KRT9P35527 623 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 BNIP3LO60238 219 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 GNAI3P08754 354 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 MMTAG2Q9BU76 263 aaKnown RBP10.18□□□□□ -0.78
TTC3-216ENST00000479930 HSF2BPO75031 334 aa10.18□□□□□ -0.78
TTC3-216ENST00000479930 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 BAG1Q99933 345 aaPredicted RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 TMX1Q9H3N1 280 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 VPS52Q8N1B4 723 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 TTC12Q9H892 705 aaPredicted RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 ZYXQ15942 572 aaKnown RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 UBXN8O00124 270 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 FAM114A2Q9NRY5 505 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 TSPY2A6NKD2 308 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 RRP1P56182 461 aaKnown RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 KHDRBS2Q5VWX1 349 aaKnown RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 DCPSQ96C86 337 aaKnown RBP10.17□□□□□ -0.78
TTC3-216ENST00000479930 SWAP70Q9UH65 585 aa10.17□□□□□ -0.78
TTC3-216ENST00000479930 HLTFQ14527 1009 aaKnown RBP eCLIP10.16□□□□□ -0.786e-7■■■□□ 18.1
TTC3-216ENST00000479930 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
TTC3-216ENST00000479930 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
TTC3-216ENST00000479930 NAPBQ9H115 298 aa10.16□□□□□ -0.78
TTC3-216ENST00000479930 STK10O94804 968 aaKnown RBP10.16□□□□□ -0.78
TTC3-216ENST00000479930 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms