RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
C9orf3-217ENST00000479161 ABCC4O15439 1325 aa19.64■□□□□ 0.73
C9orf3-217ENST00000479161 RTL9Q8NET4 1388 aa19.64■□□□□ 0.73
C9orf3-217ENST00000479161 F6X3S4 739 aa19.63■□□□□ 0.73
C9orf3-217ENST00000479161 CCDC152Q4G0S7 254 aa19.63■□□□□ 0.73
C9orf3-217ENST00000479161 SP8Q8IXZ3 490 aa19.63■□□□□ 0.73
C9orf3-217ENST00000479161 PSMD1Q99460 953 aa19.63■□□□□ 0.73
C9orf3-217ENST00000479161 TAOK3Q9H2K8 898 aa19.63■□□□□ 0.73
C9orf3-217ENST00000479161 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
C9orf3-217ENST00000479161 SRCIN1Q9C0H9 1055 aa19.62■□□□□ 0.73
C9orf3-217ENST00000479161 VPS33BQ9H267 617 aa19.62■□□□□ 0.73
C9orf3-217ENST00000479161 UTYO14607 1347 aa19.61■□□□□ 0.73
C9orf3-217ENST00000479161 PPEF1O14829 653 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-217ENST00000479161 FKBP4Q02790 459 aaKnown RBP eCLIP19.61■□□□□ 0.73
C9orf3-217ENST00000479161 TMX4Q9H1E5 349 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-217ENST00000479161 LRRC37AA6NMS7 1700 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 GRM8O00222 908 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 CSF1RP07333 972 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 CTSWP56202 376 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
C9orf3-217ENST00000479161 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 TTLL11Q8NHH1 800 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
C9orf3-217ENST00000479161 TAF1P21675 1872 aa19.6■□□□□ 0.73
C9orf3-217ENST00000479161 RPS8P62241 208 aaKnown RBP19.59■□□□□ 0.73
C9orf3-217ENST00000479161 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
C9orf3-217ENST00000479161 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.72
C9orf3-217ENST00000479161 RTFDC1Q9BY42 306 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-217ENST00000479161 RNF181Q9P0P0 153 aa19.58■□□□□ 0.72
C9orf3-217ENST00000479161 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
C9orf3-217ENST00000479161 PRELPP51888 382 aa19.57■□□□□ 0.72
C9orf3-217ENST00000479161 RASSF7Q02833 373 aa19.57■□□□□ 0.72
C9orf3-217ENST00000479161 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
C9orf3-217ENST00000479161 NOB1Q9ULX3 412 aaKnown RBP19.57■□□□□ 0.72
C9orf3-217ENST00000479161 SUPT20HQ8NEM7 779 aa19.56■□□□□ 0.72
C9orf3-217ENST00000479161 CELF1Q92879 486 aaKnown RBP19.56■□□□□ 0.72
C9orf3-217ENST00000479161 CDC5LQ99459 802 aaKnown RBP19.56■□□□□ 0.72
C9orf3-217ENST00000479161 C9orf78Q9NZ63 289 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-217ENST00000479161 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-217ENST00000479161 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
C9orf3-217ENST00000479161 FOXO4P98177 505 aa19.54■□□□□ 0.72
C9orf3-217ENST00000479161 PODXL2Q9NZ53 605 aa19.54■□□□□ 0.72
C9orf3-217ENST00000479161 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
C9orf3-217ENST00000479161 OLFM4Q6UX06 510 aa19.53■□□□□ 0.72
C9orf3-217ENST00000479161 MPNDQ8N594 471 aa19.53■□□□□ 0.72
C9orf3-217ENST00000479161 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
C9orf3-217ENST00000479161 HDAC5Q9UQL6 1122 aa19.53■□□□□ 0.72
C9orf3-217ENST00000479161 TIAM2Q8IVF5 1701 aa19.53■□□□□ 0.72
C9orf3-217ENST00000479161 LTBP1Q14766 1721 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 INTS3Q68E01 1043 aaKnown RBP19.52■□□□□ 0.72
C9orf3-217ENST00000479161 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 GREM2Q9H772 168 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 CEP350Q5VT06 3117 aa19.52■□□□□ 0.72
C9orf3-217ENST00000479161 RABL6Q3YEC7 729 aaPredicted RBP19.51■□□□□ 0.71
C9orf3-217ENST00000479161 DPP8Q6V1X1 898 aaPredicted RBP19.51■□□□□ 0.71
C9orf3-217ENST00000479161 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
C9orf3-217ENST00000479161 GLTPD2A6NH11 291 aa19.5■□□□□ 0.71
C9orf3-217ENST00000479161 BCAR3O75815 825 aa19.5■□□□□ 0.71
C9orf3-217ENST00000479161 NBPF7P0C2Y1 421 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-217ENST00000479161 DPY19L2Q6NUT2 758 aa19.5■□□□□ 0.71
C9orf3-217ENST00000479161 COL4A1P02462 1669 aa19.49■□□□□ 0.71
C9orf3-217ENST00000479161 FZD9O00144 591 aa19.49■□□□□ 0.71
C9orf3-217ENST00000479161 ITGA6P23229 1130 aa19.49■□□□□ 0.71
C9orf3-217ENST00000479161 KAZALD1Q96I82 304 aa19.49■□□□□ 0.71
C9orf3-217ENST00000479161 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-217ENST00000479161 ZNF277Q9NRM2 450 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-217ENST00000479161 ANKRD18BA2A2Z9 1011 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 TRIM27P14373 513 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 KIAA2012Q0VF49 1180 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 IFIT5Q13325 482 aaKnown RBP19.48■□□□□ 0.71
C9orf3-217ENST00000479161 ZKSCAN2Q63HK3 967 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
C9orf3-217ENST00000479161 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
C9orf3-217ENST00000479161 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
C9orf3-217ENST00000479161 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
C9orf3-217ENST00000479161 WDR90Q96KV7 1748 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 C1QTNF8P60827 252 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 EYA3Q99504 573 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 XDHP47989 1333 aa19.46■□□□□ 0.71
C9orf3-217ENST00000479161 GPSM2P81274 684 aa19.45■□□□□ 0.7
C9orf3-217ENST00000479161 LARGE2Q8N3Y3 721 aa19.45■□□□□ 0.7
C9orf3-217ENST00000479161 CCDC85AQ96PX6 553 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-217ENST00000479161 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
C9orf3-217ENST00000479161 PPIP5K2O43314 1243 aa19.44■□□□□ 0.7
C9orf3-217ENST00000479161 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
C9orf3-217ENST00000479161 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
C9orf3-217ENST00000479161 ANKRD2Q9GZV1 360 aa19.44■□□□□ 0.7
C9orf3-217ENST00000479161 POLLQ9UGP5 575 aa19.44■□□□□ 0.7
C9orf3-217ENST00000479161 GNAI3P08754 354 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 UBTFL1P0CB47 393 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms