RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	PRPF40A	O75400	957 aa	Known RBP	33.18	■■■□□ 2.9
CHKB-208	ENST00000479003	KCNQ4	P56696	695 aa		33.18	■■■□□ 2.9
CHKB-208	ENST00000479003	ZNF831	Q5JPB2	1677 aa		33.18	■■■□□ 2.9
CHKB-208	ENST00000479003	BRWD3	Q6RI45	1802 aa		33.17	■■■□□ 2.9
CHKB-208	ENST00000479003	CWC25	Q9NXE8	425 aa	Predicted RBP	33.16	■■■□□ 2.9
CHKB-208	ENST00000479003	EPHA10	Q5JZY3	1008 aa		33.16	■■■□□ 2.9
CHKB-208	ENST00000479003	CAVIN1	Q6NZI2	390 aa	Known RBP	33.16	■■■□□ 2.9
CHKB-208	ENST00000479003	ECHDC1	Q9NTX5	307 aa		33.16	■■■□□ 2.9
CHKB-208	ENST00000479003	TCIRG1	Q13488	830 aa		33.15	■■■□□ 2.9
CHKB-208	ENST00000479003	HLF	Q16534	295 aa		33.15	■■■□□ 2.9
CHKB-208	ENST00000479003	NOL8	Q76FK4	1167 aa	Known RBP	33.15	■■■□□ 2.9
CHKB-208	ENST00000479003	SNX14	Q9Y5W7	946 aa		33.15	■■■□□ 2.9
CHKB-208	ENST00000479003	EIF5	P55010	431 aa	Known RBP	33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	CASP7	P55210	303 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	ZSCAN23	Q3MJ62	389 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	NCL	P19338	710 aa	Known RBP	33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	ZNF772	Q68DY9	489 aa	Predicted RBP	33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	CCDC191	Q8NCU4	936 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	LINC00116	Q8NCU8	138 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	GPT2	Q8TD30	523 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	ISCA1	Q9BUE6	129 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	TBC1D2B	Q9UPU7	963 aa		33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	PA2G4	Q9UQ80	394 aa	Known RBP	33.14	■■■□□ 2.9
CHKB-208	ENST00000479003	GPATCH3	Q96I76	525 aa		33.13	■■■□□ 2.89
CHKB-208	ENST00000479003	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.13	■■■□□ 2.89
CHKB-208	ENST00000479003	DZIP3	Q86Y13	1208 aa	Known RBP	33.13	■■■□□ 2.89
CHKB-208	ENST00000479003	CWC27	Q6UX04	472 aa	Known RBP	33.12	■■■□□ 2.89
CHKB-208	ENST00000479003	KIAA1211	Q6ZU35	1233 aa		33.12	■■■□□ 2.89
CHKB-208	ENST00000479003		H7C1W4	665 aa		33.11	■■■□□ 2.89
CHKB-208	ENST00000479003	IFIT2	P09913	472 aa	Known RBP	33.11	■■■□□ 2.89
CHKB-208	ENST00000479003	TTC14	Q96N46	770 aa		33.11	■■■□□ 2.89
CHKB-208	ENST00000479003	KRT27	Q7Z3Y8	459 aa		33.1	■■■□□ 2.89
CHKB-208	ENST00000479003	RUFY2	Q8WXA3	655 aa		33.1	■■■□□ 2.89
CHKB-208	ENST00000479003	NASP	P49321	788 aa	Predicted RBP	33.1	■■■□□ 2.89
CHKB-208	ENST00000479003	DIAPH3	Q9NSV4	1193 aa		33.1	■■■□□ 2.89
CHKB-208	ENST00000479003	COL15A1	P39059	1388 aa		33.09	■■■□□ 2.89
CHKB-208	ENST00000479003	RBM6	P78332	1123 aa	Known RBP	33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	FOXD4L5	Q5VV16	416 aa	Predicted RBP	33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	CHAMP1	Q96JM3	812 aa		33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	NUP98	P52948	1817 aa		33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	RASEF	Q8IZ41	740 aa		33.08	■■■□□ 2.89
CHKB-208	ENST00000479003	CLCN1	P35523	988 aa		33.07	■■■□□ 2.88
CHKB-208	ENST00000479003	TRIM28	Q13263	835 aa	Known RBP	33.07	■■■□□ 2.88
CHKB-208	ENST00000479003	ANKRD36C	Q5JPF3	1778 aa		33.07	■■■□□ 2.88
CHKB-208	ENST00000479003	AACS	Q86V21	672 aa		33.07	■■■□□ 2.88
CHKB-208	ENST00000479003	LY75	O60449	1722 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	ERVV-1	B6SEH8	477 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	SASH1	O94885	1247 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	GPT	P24298	496 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	CCDC173	Q0VFZ6	552 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	EVI5L	Q96CN4	794 aa		33.06	■■■□□ 2.88
CHKB-208	ENST00000479003	PPP1R9B	Q96SB3	815 aa		33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	MBD3	O95983	291 aa		33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	G3BP1	Q13283	466 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	RABL6	Q3YEC7	729 aa	Predicted RBP	33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.05	■■■□□ 2.88
CHKB-208	ENST00000479003	CCNL1	Q9UK58	526 aa	Predicted RBP	33.04	■■■□□ 2.88
CHKB-208	ENST00000479003	FAM196A	Q6ZSG2	479 aa		33.03	■■■□□ 2.88
CHKB-208	ENST00000479003	TRIM44	Q96DX7	344 aa	Predicted RBP	33.03	■■■□□ 2.88
CHKB-208	ENST00000479003	RBM27	Q9P2N5	1060 aa	Known RBP	33.03	■■■□□ 2.88
CHKB-208	ENST00000479003	HSP90AB3P	Q58FF7	597 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	CNTNAP4	Q9C0A0	1308 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	WDR33	Q9C0J8	1336 aa	Known RBP	33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	AK2	P54819	239 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	FOXO4	P98177	505 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	NLRP10	Q86W26	655 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	KLHDC4	Q8TBB5	520 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	KCNB2	Q92953	911 aa		33.02	■■■□□ 2.88
CHKB-208	ENST00000479003	EAF2	Q96CJ1	260 aa	Predicted RBP	33.01	■■■□□ 2.88
CHKB-208	ENST00000479003	TMEM63C	Q9P1W3	806 aa		33.01	■■■□□ 2.87
CHKB-208	ENST00000479003	ESPN	B1AK53	854 aa		33	■■■□□ 2.87
CHKB-208	ENST00000479003	CAMTA2	O94983	1202 aa		33	■■■□□ 2.87
CHKB-208	ENST00000479003	PTH1R	Q03431	593 aa		33	■■■□□ 2.87
CHKB-208	ENST00000479003	FAM89A	Q96GI7	184 aa		33	■■■□□ 2.87
CHKB-208	ENST00000479003	NSFL1C	Q9UNZ2	370 aa	Known RBP	33	■■■□□ 2.87
CHKB-208	ENST00000479003	LIMCH1	Q9UPQ0	1083 aa		33	■■■□□ 2.87
CHKB-208	ENST00000479003	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	33	■■■□□ 2.87
CHKB-208	ENST00000479003	LMBR1L	Q6UX01	489 aa		32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	RUFY3	Q7L099	469 aa		32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	ANP32B	Q92688	251 aa	Known RBP	32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	UBN2	Q6ZU65	1347 aa		32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	FBXO41	Q8TF61	875 aa		32.99	■■■□□ 2.87
CHKB-208	ENST00000479003	HIP1	O00291	1037 aa		32.98	■■■□□ 2.87
CHKB-208	ENST00000479003	TAF1L	Q8IZX4	1826 aa		32.98	■■■□□ 2.87
CHKB-208	ENST00000479003	PCCA	P05165	728 aa	Predicted RBP	32.98	■■■□□ 2.87
CHKB-208	ENST00000479003	RFX5	P48382	616 aa	Predicted RBP	32.98	■■■□□ 2.87
CHKB-208	ENST00000479003	SMIM5	Q71RC9	77 aa		32.98	■■■□□ 2.87
CHKB-208	ENST00000479003	TRIM37	O94972	964 aa		32.97	■■■□□ 2.87
CHKB-208	ENST00000479003	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.97	■■■□□ 2.87
CHKB-208	ENST00000479003	TM6SF1	Q9BZW5	370 aa		32.97	■■■□□ 2.87
CHKB-208	ENST00000479003	SIL1	Q9H173	461 aa		32.97	■■■□□ 2.87
CHKB-208	ENST00000479003	LRSAM1	Q6UWE0	723 aa		32.96	■■■□□ 2.87
CHKB-208	ENST00000479003	ZNF34	Q8IZ26	560 aa		32.96	■■■□□ 2.87
CHKB-208	ENST00000479003	SYNE4	Q8N205	404 aa		32.96	■■■□□ 2.87
CHKB-208	ENST00000479003	RBSN	Q9H1K0	784 aa		32.96	■■■□□ 2.87
CHKB-208	ENST00000479003	CAST	P20810	708 aa	Known RBP	32.96	■■■□□ 2.87
CHKB-208	ENST00000479003	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.96	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms